Pseudocitrobacter corydidari: G163CM_31230
Help
Entry
G163CM_31230 CDS
T07750
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc02024
Quorum sensing
psgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G163CM_31230 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G163CM_31230 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psgc03019
]
G163CM_31230 (hfq)
03036 Chromosome and associated proteins [BR:
psgc03036
]
G163CM_31230 (hfq)
Messenger RNA biogenesis [BR:
psgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
G163CM_31230 (hfq)
Chromosome and associated proteins [BR:
psgc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
G163CM_31230 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Herpes_capsid
Motif
Other DBs
NCBI-ProteinID:
UGS42394
UniProt:
A0ABY3S8H5
LinkDB
All DBs
Position
complement(3349039..3349350)
Genome browser
AA seq
103 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTSSNYHHGSNAQGSTTAQQDSDDTE
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagacccgttcctgaacgcactacgtcgggagcgtgtt
ccggtttctatttatttggtgaatggtattaagctgcaaggtcaaattgagtccttcgac
cagttcgtgatcctgttgaaaaacacggtcagccagatggtctataagcacgcaatttcc
actgttgttccgtcccgtccggtatctcatcacagcaataacgctggcggcggcaccagc
agtaactaccatcatggtagcaacgcgcagggttcaaccactgcgcagcaagacagcgac
gacacagaataa
DBGET
integrated database retrieval system