Pseudocitrobacter corydidari: G163CM_33630
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Entry
G163CM_33630 CDS
T07750
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc00071
Fatty acid degradation
psgc00280
Valine, leucine and isoleucine degradation
psgc00310
Lysine degradation
psgc00362
Benzoate degradation
psgc00380
Tryptophan metabolism
psgc00410
beta-Alanine metabolism
psgc00640
Propanoate metabolism
psgc00650
Butanoate metabolism
psgc00907
Pinene, camphor and geraniol degradation
psgc00930
Caprolactam degradation
psgc01100
Metabolic pathways
psgc01110
Biosynthesis of secondary metabolites
psgc01120
Microbial metabolism in diverse environments
psgc01200
Carbon metabolism
psgc01212
Fatty acid metabolism
Module
psgc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
G163CM_33630 (fadB)
00650 Butanoate metabolism
G163CM_33630 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
G163CM_33630 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
G163CM_33630 (fadB)
00310 Lysine degradation
G163CM_33630 (fadB)
00380 Tryptophan metabolism
G163CM_33630 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
G163CM_33630 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
G163CM_33630 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
G163CM_33630 (fadB)
00930 Caprolactam degradation
G163CM_33630 (fadB)
Enzymes [BR:
psgc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
G163CM_33630 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
G163CM_33630 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
G163CM_33630 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
G163CM_33630 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
CetZ_C
Motif
Other DBs
NCBI-ProteinID:
UGS42614
LinkDB
All DBs
Position
3625799..3627988
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLNWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQKELKGLLLRSE
KAAFIVGADITEFLSLFLVPEEQLSEWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKHEKLIDGALSVLRQAINGDLDWRAKRRPKLEPLKLSKVEATMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAARLGRDEALKLENQSFVPLAHTNEARALVGIFLNDQYVK
GLAKKLAKTTDAPKHAAVLGAGIMGGGIAYQSAWKGVPVIMKDINEKSLTLGMTEASKLL
NKQLERGKIDGLKLAGVISTIQPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRP
DAVLASNTSTIPIGELADALERPENFCGMHFFNPVHRMPLVEIIRGKKTSEQTIAKVVSW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKP
KKEEDAQTDSLLADVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYDVPEGLRNKARHNEPYYPAVEPA
RPVGTLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgataccctgtacctcaactggctggaagatggcattgccgaactg
gtgttcgacgcccccggctcggtgaataaattagatacggcgaccgtagccagcctcggt
cacgcgctcgatgtcctcgaaaaacaaaaagagctgaaagggctgctgctgcgctctgaa
aaagcggcgtttatcgtcggcgcagacattaccgaattcctctcgctgttcctggtgcca
gaagaacagctcagcgaatggctgcatttcgccaacagcgtcttcaaccgtctggaagat
ttaccggttccgaccatcgccgccgttaacggctacgcgctgggcggcggctgcgaatgc
gtactggcgaccgattaccgtttagccacgccagacctgcgcatcggcctgccggaaacc
aaactggggatcatgcccggctttggcggttccgtgcgtatgccacgcctgttgggcgcg
gacagcgcgctggaaattatcgccgccgggaaagatgttggtgcggagcaggcgctgaaa
atcggcctggtggatggcgttgttaaacacgagaaactgatcgatggtgcgctgtccgta
ttgcgccaggcgataaatggcgatctcgactggcgcgcgaagcgtcgtccgaaactggaa
ccgctgaagcttagtaaagtggaagccaccatgagcttcactatcgccaaaggcatggta
atgcaaaccgcaggcaaacattaccctgcccccattaccgccgtgaaaaccattgaagcc
gctgcacgtctggggcgcgatgaagccttgaagctggaaaaccaaagctttgtcccgctg
gcgcacaccaacgaagcgcgcgcgctggttggtatcttcctgaacgatcaatacgtaaaa
ggtctggcgaaaaaactcgccaaaaccaccgatgcgccgaaacacgccgccgttctgggc
gcgggtattatgggcggcggtatcgcgtatcaatcggcctggaaaggcgtgccggtgatc
atgaaagatatcaacgagaaatcgctgacgcttggcatgacagaggccagcaaactgcta
aataagcagctggagcgcggaaaaattgatggtctgaaactggcaggcgtcatttccacc
atccagcctacgctggattacgccgggttcgaccgtgtcgatgtggttgtggaagcggtt
gttgaaaatccgaaggtgaaaaaagcggtgctggcggaaaccgagcaaaaagtccgcccg
gatgctgtgctggcctccaacacttcaaccattccgatcggcgaactggccgacgcgctg
gagcgtccggaaaacttctgcggcatgcacttcttcaacccggtgcaccgcatgccgctg
gttgagatcattcgcggcaaaaagaccagtgagcaaaccatcgccaaagtggtttcctgg
gccagccagatgggcaaaacgccgatcgtggtcaacgactgccccggcttcttcgttaac
cgcgtgctgttcccctacttcgccggttttagccagttgctgcgcgacggcgcggatttc
cgcaaagtcgacaaagtaatggagaaacagtttggctggccgatgggcccggcttatctg
ctggacgtggtcggtatcgacaccgcacatcacgcacaagccgtgatggcagcaggtttc
ccgcagcgcatgcagaaagattatcgcgacgccatcgacgccctgtttgatgccagccgc
ttcgggcagaaaaatggccttggcttctggcgctataaagaagacagcaaaggcaaaccg
aaaaaagaagaagacgcacaaaccgacagcctgctggccgacgtttcccagccgaagcgt
gacttcagcgacgaagagatcatcgcccgcatgatgatcccgatggtcaacgaagtagtg
cgctgcctggaagagggcatcattgccagcccggcagaagcagacatggcgctggtctac
ggcctgggcttccctccgttccacggcggtgcattccgctggctggatacgctgggtagc
gcgaaatatctcgatatggcgcagcagtatcagcacctcggtccgttgtatgacgtgccg
gaaggtctgcgcaataaagcgcgtcataacgaaccgtattatcccgcagtggagcccgcc
cgtccggttggcacgctgaaaacggcttaa
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