Pseudocitrobacter corydidari: G163CM_33860
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Entry
G163CM_33860 CDS
T07750
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G163CM_33860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psgc03019
]
G163CM_33860 (recQ)
03400 DNA repair and recombination proteins [BR:
psgc03400
]
G163CM_33860 (recQ)
Enzymes [BR:
psgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G163CM_33860 (recQ)
Messenger RNA biogenesis [BR:
psgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G163CM_33860 (recQ)
DNA repair and recombination proteins [BR:
psgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G163CM_33860 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UGS42637
LinkDB
All DBs
Position
complement(3649749..3651578)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQENIIDTVLEGRDCLVVMPTGGGKSLCYQIP
ALVLNGLTVVVSPLISLMKDQVDQLIANGVAAACINSTQSREQQQEVMAGCRSGQIRLLY
IAPERLMLDNFLEHLAHWNPVMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMAL
TATADDTTRRDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLDNAVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIAL
STIYRVNQRFGMGYVVEVIRGANNQRIREFGHDKLKVYGMGREKSHEHWVSVIRQLIHLG
FAMQNIAQHSALQLTDAARPIVRGEIPLMLAVPRIVALKPRVMQKAAVGNYDRKLFSKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGTRKLERFGKEFMALIR
AHVDGDDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcaggaaacc
tttggctaccagcagttccgcccgggccaggaaaacatcattgataccgtgctggaaggg
cgcgattgcctggtggtgatgccgacaggcggtggcaaatcgctctgttatcaaatcccg
gcgctggtgctgaatggcctgacggtggtggtatcgccgctgatctcgctgatgaaagac
caggtcgatcaattgatcgccaacggcgtggcggcggcctgcatcaactcaacgcagagc
cgcgagcagcagcaggaagtgatggcgggctgtcgtagcgggcagattcgcttgctctac
atcgctccggaacgcctgatgctggataacttcctggagcatctcgcccactggaatccg
gtgatgctggcggtcgatgaagcgcactgtatttcgcaatggggccatgatttccgcccg
gaatacgctgcattaggccagctgcgtcagcgcttcccggcgctgccgtttatggcgctt
accgccacggctgacgacacgacacgccgcgacattgttcgcctgctggggctgaacgac
ccgcttattcaaatcagcagcttcgatcgtcccaacattcgctacatgctgatggagaag
ttcaaaccgctcgatcaactgatgcgctacgtgcaggagcagcgcggcaagtccggcatt
atctactgtaacagccgggcgaaagtagaagacaccgccgcacgcctgcaaagccggggg
attagcgctggagcgtatcacgccgggctggataacgccgtgcgggccgatgtgcaggag
aaattccagcgcgatgacctgcaaattgtggtcgccaccgtggcgttcgggatgggtatc
aacaagcctaacgtacgttttgtggtccacttcgacatcccgcgcaatattgaatcctac
tatcaggaaacgggccgcgccgggcgtgatggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcatggctgcgccgttgcctggaagagaagcctgccgggccgtta
caggatatcgaacgtcataagctcaacgcgatgggcgcgtttgccgaagcgcaaacctgc
cgccgtctggtgttgctgaactactttggcgaagggcgtcaggagccatgtggtaactgc
gatatctgcctcgacccgcctaagcagtacgatgggttgaatgacgcacagatcgcgctc
tcgacgatttaccgggtgaatcaacgcttcgggatgggttacgtggttgaagtgattcgc
ggcgccaacaaccagcgtattcgcgagtttggccacgacaagctcaaggtctacggcatg
gggcgtgaaaagagccatgagcactgggtgagcgtgatccgccagttgattcatctgggc
tttgcgatgcagaacatcgcccagcactccgctctgcaactgactgacgccgcacggccc
attgttcgtggagagattccgttgatgctggcggtgccgcgtattgtcgccctgaaaccg
cgcgtgatgcagaaagccgcagtgggtaactacgaccgtaaactgttttccaaactgcgc
aagctgcgtaaagccatcgccgatgaagagaacatcccgccttacgtggtcttcaacgat
gcgacgctgattgaaatggcggagcagatgccggtttccgccagcgaaatgctcagcgtc
aacggcgtggggacgcgtaaactggaacgctttggtaaagagtttatggcgctgatccgc
gcacatgtggatggcgacgatgatgagtag
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