Pseudocitrobacter corydidari: G163CM_33960
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Entry
G163CM_33960 CDS
T07750
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc00300
Lysine biosynthesis
psgc00470
D-Amino acid metabolism
psgc01100
Metabolic pathways
psgc01110
Biosynthesis of secondary metabolites
psgc01120
Microbial metabolism in diverse environments
psgc01230
Biosynthesis of amino acids
Module
psgc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G163CM_33960 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G163CM_33960 (dapF)
Enzymes [BR:
psgc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
G163CM_33960 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UGS42647
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Position
complement(3660995..3661819)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTDDDLVRVNMGE
PNFEPSQVPFRANKAEKTYIMRAAEQTVLCGVVSMGNPHCVIQVDDVETAAVESLGPVME
SHDRFPERANIGFMQVVKRDHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLDEEVRV
ELPGGRLDIAWRGPGQPLYMTGPAAHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtgacg
cagaatgtgtttttctcgccggaattgattcgtcgtctggcggacaggcatctgggcgtc
ggcttcgaccaactgctggtcgtcgagccgccctacgatcccgatctcgatttccactat
cgcatctttaatgccgacggcagcgaagtgtcgcagtgtggcaacggggcgcgctgcttt
gcgcgtttcgtgcgtctgaaaggcctgaccaataaacgtgatattcgcgtcagtaccgcc
aacgggcgtatggtattaagcgtgacggacgacgatctggttcgcgtgaatatgggcgag
ccgaatttcgagccttcgcaggtgccgttccgcgccaacaaagcggaaaagacctatatt
atgcgagcggccgagcagacagtattgtgcggcgtggtctcgatgggtaacccgcactgc
gtgattcaggtcgatgatgttgaaacggcggcggttgagtcgctgggcccggtgatggaa
agccacgatcgctttccggaacgcgccaatatcggttttatgcaggtggttaaacgcgat
cacatccgtttgcgcgtctatgagcgcggcgcgggtgagacgcaggcttgcggcagcggc
gcttgtgcggcggtggctgtgggtatccagcaggggctactggacgaagaggttcgcgtg
gagttaccgggcggacgtctggatatcgcctggagaggcccgggtcaaccgttgtatatg
actggcccggcggcacacgtctatgacggatttattcacttatga
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