Pseudocitrobacter corydidari: G163CM_36050
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Entry
G163CM_36050 CDS
T07750
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psgc
Pseudocitrobacter corydidari
Pathway
psgc03030
DNA replication
psgc03410
Base excision repair
psgc03420
Nucleotide excision repair
psgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G163CM_36050 (polA)
03410 Base excision repair
G163CM_36050 (polA)
03420 Nucleotide excision repair
G163CM_36050 (polA)
03440 Homologous recombination
G163CM_36050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psgc03032
]
G163CM_36050 (polA)
03400 DNA repair and recombination proteins [BR:
psgc03400
]
G163CM_36050 (polA)
Enzymes [BR:
psgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G163CM_36050 (polA)
DNA replication proteins [BR:
psgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G163CM_36050 (polA)
DNA repair and recombination proteins [BR:
psgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G163CM_36050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G163CM_36050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UGS42842
UniProt:
A0ABY3S7Z7
LinkDB
All DBs
Position
3893753..3896545
Genome browser
AA seq
930 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNGAGEPTGAMYGVLNMLRSLLLQYQPTHAVV
VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLMAVSGVEADDVIGT
LAREAEAAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELELTCEQLEVQPPAAEELLGLFKKYEFKRWITDVESGKWLQAK
GAKPTKSAAKPAETIMVEDEVETTATLSADNYVTILDEATLVEWIEKLKKAPLFAFDTET
DSLDNVSANMVGLSFATEPGVAAYVPVAHDYLDAPEQISRERALELLKPLLEDEKCLKVG
QNLKYDRGILANYGIELRGIAYDTMLESYTLDSVAGRHDMDSLSERWLKHKTITFEEIAG
KGKKQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKEKGPLSVFENIEMPLVPVLS
RVERNGVKIDPAVLHAHSQEIAKRLVELEQKAFEVAGEEFNLSSPKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPKDYVIVSADYSQIELRIMAHLS
RDKGLLTAFAEGKDIHRATAAEVFGLPLESVSSEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVLEYMERTRAQAKDQGYVETLDGRRLYLPDIKSSNGARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLESEKPRVRMIMQVHDELVFEVHKDDVDAVSK
KIHELMENSTKLDVPLLVEVGSGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatccccgaaaatccccttatcctcgttgatggctcttcgtatctttacagg
gcgtatcatgctttcccaccgctgaccaatggcgcaggtgaaccgaccggcgcgatgtat
ggcgtgttgaatatgctgcgcagcctgttgctgcaatatcagccgacgcatgcggtcgtg
gtatttgatgcgaagggtaaaaccttccgtgacgaactgtttgaggattacaaatctcac
cgaccaccgatgcctgacgatctgcgtgcgcagatcgagccgctgcacgcgatggtaaaa
gccatggggcttccgttgatggctgtatcgggcgttgaagcggatgatgtaatcggcacg
ctggcgcgcgaagcggaagcggcgggtcgcccggtgttgatcagcaccggtgataaagat
atggcgcagctggttacgccaggtatcaccctgattaacaccatgaccaacaccattctt
ggcccggatgaagtggtaaccaagtacggtgtgccgccggaactgatcatcgacttcctc
gcgctgatgggcgactcctcggataacattcctggcgtgccgggcgtgggcgaaaaaacc
gcgcaggctctgcttcaggggctgggggggctggataccctttatgctgagtcggataaa
atcgccgggctgagcttccgtggcgcgaaaaccatggccgcgaagctcgagcagaacaaa
gaggtggcctatctctcctataaactcgcgaccatcaaaaccgacgttgagctggaactg
acctgtgaacagctggaagtacagccgccagcggcggaagaactgttgggcctgttcaaa
aagtacgagtttaaacgctggataaccgatgttgagtccggtaaatggttgcaggcgaaa
ggcgcgaagccgacgaaatccgccgctaaacctgcggaaaccatcatggtggaagatgaa
gtcgaaactaccgccaccctgagcgccgataactacgttacgatcctggacgaggcgacc
ctggtcgagtggattgagaagctgaaaaaagcgccgttgtttgctttcgatacggaaacg
gacagcctcgataatgtctctgccaatatggttggcctgtcgttcgcaaccgaacccggt
gttgccgcgtacgtgccagtggcgcacgattatcttgacgcgccagaacagatttcccgc
gaacgcgcgctggaactgctcaagccgctgctggaagatgaaaaatgcctgaaagtcggg
cagaacctgaaatatgaccgcgggatcctcgctaactacggtattgaactgcgtgggatt
gcctatgacaccatgctggaatcctacacgctggatagcgttgcgggccgccacgacatg
gacagcctttccgaacgctggctgaagcacaaaaccatcacctttgaagagatcgccggt
aaaggtaagaagcaactgaccttcaaccagatcgcactggaagaagcaggccgctatgcg
gcggaagacgccgacgtcacgctgcaactgcatctgaaaatgtggccgaagctgcaaaag
gagaaggggccgctgagcgtcttcgaaaatatcgagatgccactggtgccggtgctgtcg
cgcgtggaacgcaacggcgtgaagatcgacccggccgtgctgcatgcgcattcgcaggag
attgcgaaacggctggtggagctggagcagaaagcctttgaggtcgcaggtgaagagttt
aacctctcctcgccgaaacagttgcaaaccattctgtttgaaaaacagggcattaaaccg
ctgaagaaaacgccgggcggcgcaccgtctacgtcggaagaagtgctggaagagctggcg
ctggattatccgctgccaaaagtcattcttgaatatcgcggcctcgcgaagctgaaatcc
acctataccgacaaactgccgttgatgatcaacccgaaaaccgggcgcgtgcacacgtct
tatcatcaggctgtcaccgcaacggggcgtctctcctcgacggatccgaacctgcaaaac
attccggtacgtaatgatgaagggcgtcgtattcgccaggcgtttattgcgccgaaagat
tacgtgattgtctctgcggactactcgcaaatcgagctgcgcattatggcgcatctgtcg
cgtgataagggcctgctgaccgcgtttgcggaagggaaagatatccaccgcgcgacggcg
gcggaagtttttggcttgccattagagagcgtaagcagcgagcagcgtcgcagcgcgaag
gcgattaacttcggtctgatctacggcatgagcgcttttggcctctctcgccagctcaac
attccgcgtaaagagtcgcagaagtatatggatctctacttcgagcgttaccctggcgta
ctggagtatatggagcgtacccgagcacaggcgaaagatcagggctacgttgaaacgctg
gatggccgtcgtctttacctcccggacatcaaatccagcaacggcgcgcgtcgtgccggg
gctgaacgagccgcgatcaacgccccaatgcagggcactgccgcagatatcatcaagcgt
gcgatgattgctgtggatgcctggcttgagagcgaaaaaccgcgcgtgcgtatgattatg
caggtgcacgatgaactggtgtttgaagtacataaagatgatgtggatgccgtgtcgaag
aaaatccatgaactgatggaaaacagcaccaaactggatgtgccattgctggtggaagtg
ggcagtggcgaaaactgggatcaggcgcactaa
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