Stutzerimonas stutzeri RCH2: Psest_0212
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Entry
Psest_0212 CDS
T02391
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psest_0212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_0212
Enzymes [BR:
psh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Psest_0212
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psest_0212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGA84823
UniProt:
L0GDJ6
LinkDB
All DBs
Position
213329..216628
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AA seq
1099 aa
AA seq
DB search
MLSLYHAPDLETLGELATRLLAQPLADPFAPALVVVPSQGMGRWLTLELARKQGIAMQLE
IQLPAKFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYLDGGDER
RRLSLAAKIADVFDQYLLYRDDWLAAWERGETFDLGPDEAWQALLWRELTKDGHPHRARL
LGDLLQRLYSDEPLPGLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCALNPSREAWGE
IRDIRELARQPESGADDWYLDVGHPLLASLGKQGRDFFDSLFSLTASEGSQEFGLYSEDE
DLRDDSLLHALQNDILRLRTRQPDERIVLAENDRSLEVHIAHSPLREVEILHDQLLARFA
TNPALTPDQVVVLTPDIERYAPFIEAVFAPREGSPRIPYSLADRSLRAEMPLIEAFLELL
MLAQSRFTAEEVLAWLEQPAIARRAGIESEDLPLLRDWLRDAGVRWGRDGSQRARLGLPD
ESAFTWRQGLDRLLLGFAAPPQLAGDHAPLLGEHWPLDALEGARGQLLGRLVEFVERLGV
LADQLARPRPLAEWADDLQILIDTLFDEREAGDTLLLLSLACAALRDQAQAADLTRPIEL
ELVHQQLSAALQQGGGASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGF
DLIGRHPRRGDRARRLDDRYLLLETLLSAREALYLSYVGRDPRDNAVLPPSVLLSEVLEA
VDMTAELPVAQASEHTGESVPKTASQKILVAHPLQPFSPRNFGDGLCTGFSSPWFRAAGR
LAEPPQTQPQPFASLLAEPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLAS
DEPFDLEMPAWNGLRRLSLQAMEHGWSDDDERRMACAAGWLPTGELGQALWGKLRGPVRA
FAPRLFELRPDDVPEPLPVDITLAGVRVHGWLDGVTPAGLFGWKLGRLGEWDLPPFWLRH
LLLNLSATPGIERHSLMLSPAGDWQLGPLANAAGLLEPWLEAYRCAIREPLPLLPRSSHA
FAKGYRKPARGSEPLDCGRKRAREAWLGAEFSPIAAEGEDPWNMLAFRDRDPLDQRFETL
AQELIGPALDALAEDEEEA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctctaccacgcccctgatctggaaaccctcggcgaactggccacgcgcctg
ctcgcccagccactcgccgatcccttcgccccggcgttggtggtggtaccgagccagggc
atggggcgctggctgacgctggagctggcgcgcaagcagggcatcgccatgcagctggag
atacagctgccggccaagttcgtctgggacctgagccgcaccgtgctgggcagtctgccg
gagcaatcggcgttttccccgacgaccctgacctggcgcctttatggctggctgtgcgag
ccggccaatctcgagctggcgccgcgtctggcgcagtacctcgacggtggcgacgagcgc
cggcggctgtcgctggcagcgaagatcgccgacgtgttcgaccagtatctgctctatcgt
gacgactggctggcggcctgggagcgaggcgaaaccttcgatctcggcccggacgaagcc
tggcaggcgctgctctggcgcgaactgaccaaggacggccacccgcaccgcgcacggctg
ctcggcgatctgctacagcggctctacagcgacgaacccttgcccggtctgcccgagcgc
ttgctggtgttcggcatcagtagcctgccgccgcaccatctgcgcgtgctcgacggcctg
gcgcggcatatcgacgtggtggtctgcgcactgaaccccagccgcgaggcctggggcgag
attcgcgatatccgcgagctggcgcgccagcccgagagtggggctgacgattggtatctc
gacgtgggccatccgctgctggccagtctcggcaaacagggccgcgatttcttcgattcc
ttgttcagcctgaccgccagcgagggcagccaggagttcggcctgtattccgaagacgaa
gacctgcgcgacgacagcctgctgcacgcgctgcagaacgacatcctgcgcctgcgcacc
cgacaacccgatgagcgcatcgtgctcgccgagaatgaccgttcgctggaagtgcatatc
gcccattcgccgctgcgcgaggtagagatcctgcatgaccagctgctggcgcgtttcgcc
accaacccggcgctgacgcccgatcaggtggtggtgctgacgcccgatatcgagcgttac
gcgccctttatcgaagccgtgttcgccccgcgcgagggcagcccgcggattccctacagc
ctcgccgaccgcagcctgcgcgccgaaatgccgctgatcgaggccttcctcgaactgctg
atgctggcgcagagccgtttcaccgccgaggaagtcctcgcctggctggagcagccggcc
attgcccggcgcgccgggatcgaaagcgaagacctgccgctgctgcgcgactggctacgc
gacgccggcgtgcgctggggacgtgacggcagccagcgggcgcgtctcggcctgccggac
gaatcggcctttacctggcgccaggggctggaccgcctgctgctgggctttgccgcgccg
ccgcaactggctggcgaccacgcgccactgctcggcgagcactggccgctggacgcactg
gaaggcgcgcgcgggcagttgctcgggcggctggtggagttcgtcgaacggctcggcgtc
ttggccgatcagctggcgcggccgcgtccgttggccgagtgggccgatgacctgcaaatc
ctgatcgacacgctgttcgacgagcgcgaagccggcgacacgttgctcttgttgtccctg
gcctgcgcggcgttgcgcgatcaggcccaggccgccgacctgacgcggcccatcgaactg
gaactggtgcaccagcagctcagcgccgccttgcagcagggcggcggcgcctcgggcttt
ctcaccggcgcggtgaccttctgcaccatggtgccgatgcgcagcttgccgttccgcgtg
gtctgcctgctcgggctggacgacggggcgttcccccgtcgtacgccgccctcgggtttc
gatctgatcggccggcatccgcgccgcggcgaccgtgcgcgacgcctcgatgatcgctac
ctgctgctggaaaccctgctttcggcgcgcgaagcgttgtacctgtcctatgtcggccgc
gacccgcgcgacaacgccgtgctgccgccctcggtgctgctcagcgaagtgctggaggca
gtggacatgaccgccgaactgcctgttgcacaggcttccgagcatacaggcgagtccgta
cccaagacggccagccagaaaattctcgtcgcccacccgctgcagcccttctcgccacgc
aattttggcgacgggctctgcaccggtttctcttcgccctggtttcgcgccgccgggcgt
ctggccgagccaccgcagacccagccgcaaccctttgccagcctgctcgccgaaccggat
gaggcctggctgaccatcgagccatcgcagctgctgcagtgcttccgccacccggcacgc
ttcctgctcgaacaacgccttggtctgcgtctggccgacgaccaggagtcgctcgccagc
gacgagccgttcgatctggagatgccggcctggaatggcctgcgccgtctatcgctgcag
gccatggagcacggctggagcgatgacgatgaacgccgcatggcctgtgccgccggctgg
ctgccgaccggcgagctgggccaggcgctgtggggcaagttgcgcggcccggtgcgtgcc
tttgcgccgcgcctgttcgaactgcgcccggacgacgtgcccgagccgctgccggtggat
atcaccctggccggcgtgcgcgtgcatggctggctcgacggcgtgaccccggccgggctg
ttcggctggaagctcggccgcctcggcgaatgggacctgccaccattctggctgcgccat
ctgctgctcaacctctccgccacgcccggcatcgagcgccacagcctgatgctatcgccc
gccggtgactggcagctggggccgctggcgaatgccgccgggttgctcgaaccctggctt
gaggcctatcgctgtgcgattcgtgaaccgctgccgttgctgccacgcagcagccacgcc
tttgccaagggctatcgtaagccggcccgcggcagcgagccgctcgactgtggccgcaag
cgcgcccgtgaagcctggctcggcgccgagttcagccccatcgccgccgaaggcgaagac
ccctggaacatgctggccttccgcgaccgcgatccgctggaccagcgtttcgaaaccttg
gcgcaggaattgatcggccctgcgctcgatgcgctggctgaagacgaggaggaagcatga
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