Stutzerimonas stutzeri RCH2: Psest_0214
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Entry
Psest_0214 CDS
T02391
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psest_0214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_0214
Enzymes [BR:
psh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Psest_0214
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psest_0214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
Helicase_RecD
AAA_22
SLFN-g3_helicase
UvrD_C
AAA_16
nSTAND3
CbiA
AAA_28
DEAD
Flavi_DEAD
DUF87
AAA
ATPase
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AGA84825
UniProt:
L0GHD1
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All DBs
Position
220244..222091
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AA seq
615 aa
AA seq
DB search
MTLADLPLGPLERAFVASLQRLDPHASEPVLLAAALCCEALADGDVCLPLGRLAGKRPWP
DQDFSLPPLATWRAQLDASELIGAPGDYAPLILSGERLYLARYQAYEQQLAEQLLTRAAD
APDVDEAQLSDSLARLFAFNQQSPDWQRLAAAQAVRRRLAVISGGPGTGKTTTVVRLLAA
LLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKAELPVSDAVKDALPDEARTLHRLLGSR
GDSPRVRHDAANPLALDVLVVDEASMVDLALMAKLVAALPPKARLILLGDKDQLAAVEAG
AVFAELCEGRGFDSQEAADLQRITGQNVPVETPRSRLGDAVVLLTHSHRFAGDSGIGELA
RRINGGDAKGTVALLQEGRPDLAWNAAPSPAALIERLEQGYAPYLQAVRQADPSAAFEAF
NGFRALTAQREGAFGVTGINEALEARFKRRLGVPARERWYPGRAVMVRQNDYALGLFNGD
IGLCLRTEQGLRVFFEGDDGYRGFAPARLPSHDSAFAMTVHKSQGSEFAEVLLALPEQPS
PLLTRSLFYTGITRAKRKVEIWALPARLAEAVNTRAERAAGLAERLALPRVPDRPVEALP
AAKPDEPKGDQLSLF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgccgatctgcccctcggcccactggagcgcgccttcgtcgccagcctgcag
cgcctcgacccgcatgcgtccgagccggtgctgctcgccgccgcgctctgttgcgaagcg
ctggccgatggcgacgtctgcttgccgctgggtcggttagccggcaagcggccatggccg
gatcaggatttcagcctgccgccgcttgcgacctggcgagcgcagttggatgcctcagag
ctgatcggtgcgccgggggattacgcgccgctgatcctgagcggagaacggctctacctc
gcccgttaccaggcttacgaacaacaactggctgagcagcttctgactcgcgcggcggac
gcaccggatgttgatgaagctcagctgagcgacagcctggcgcggttgttcgccttcaac
caacagagcccagactggcaacggctggcagcggctcaggcggtacgtcgtcgcttggca
gtaatctccggtggccccggtaccggcaagaccaccacggtggtgcgcctgttggcggcg
ctgctggaacagcccggtggcgaacgtctggccatcggcctcgcggcacctaccggcaaa
gcggcggcgcgcatggccgaagcgatccgcaacgccaaggccgagctgccggtcagcgat
gccgtcaaggacgctctgccggacgaagcgcgcacattgcaccgcctgctcggcagccgc
ggcgacagcccgcgcgtgcgccacgacgcggccaacccgctggcgctggacgtgctggtg
gtggacgaggcgtcgatggtcgacctggcgttgatggccaagctggtcgccgcgctgccg
ccgaaggcgcggctgatcctgctcggcgacaaggaccagctggccgccgtggaagccggc
gcggtgttcgccgagctctgcgaagggcgcggtttcgatagccaagaggccgccgatctg
caacgcattaccgggcagaacgtaccggtcgagacgccgcgctcgcgcctgggcgatgcg
gtggtgctgctcacccacagccatcgcttcgccggcgacagcggcatcggcgaactggcg
cggcgaatcaatggtggcgatgccaagggcaccgtcgcgctgctgcaggaaggccggccg
gatctggcctggaacgcagcacccagccccgcggcgctgatcgaacggctggagcagggc
tacgcaccctacctgcaagccgtacgccaggccgatccatccgccgcgttcgaggccttc
aatggctttcgcgcgctgaccgcccagcgcgaaggcgcctttggcgtcacgggtatcaac
gaggcgctggaagcgcgcttcaagcgtcgcctcggcgtgccggcgcgtgaacgctggtac
cctggccgcgcggtgatggtccggcagaacgactacgccctgggcctgttcaacggcgat
atcggcctgtgtctgaggaccgagcagggcctgcgggtgttcttcgagggcgacgacggc
taccgcggcttcgccccggcgcgactgccgagccatgacagtgccttcgccatgaccgtg
cacaaaagccagggctcggaattcgccgaagtgctgctggcgttgccggagcaacccagc
cctctgctgacgcgctcgctgttctataccggtatcacccgcgccaaacgcaaggtggag
atctgggcactgccggcgcggctggccgaggcagtcaatacccgcgccgagcgcgccgcc
ggcttggccgagcgactggcgcttccccgcgtgccggacaggcctgtcgaggcattgccg
gcggcgaagccagatgagcctaaaggcgatcagctcagcctgttctga
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