Stutzerimonas stutzeri RCH2: Psest_0239
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Entry
Psest_0239 CDS
T02391
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psest_0239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_0239
Enzymes [BR:
psh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Psest_0239
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Psest_0239
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Psest_0239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AGA84850
UniProt:
L0GHF7
LinkDB
All DBs
Position
249688..250500
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIEPHLLGQRVDRVLVRDRRLRWPVPEDLDVRLSGQRIDAVERRAKYL
LIKAETGTLIVHLGMSGSLRLVDAAQPVGKHDHVDILLESGQALRYTDPRRFGAMLWSEE
PLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGSISRARYLKLGEEVRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
AGEFCKSCGSTLREIRLGQRASVYCSRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcccagaagttgaaactacccgtcgtggcatcgagccgcacctgctcggt
cagcgcgtcgaccgcgtgctggtgcgcgaccggcgcctgcgctggccggttccggaggac
cttgatgtgcgcctgtccggccagcgtatcgatgccgtcgagcggcgcgccaagtacctg
ctgatcaaggccgaaaccggcacattgatcgtccatctgggtatgtcaggcagcctgcgc
ctggtggacgcggcgcagccggtgggcaagcacgatcacgtcgatattctgctggagtcc
ggccaggcactgcgctacaccgacccgcggcgtttcggcgcgatgctctggagcgaggag
cctctcgcccatgtgctgctggcgagcctcggacccgagccgctgggtgaggatttcgac
ggcgaccggctgtatcggctgtcccgcgggcggagcatggcggtcaagccgttcatcatg
gacaacgccgtggtggtgggcgtcggcaatatctatgcgagcgaggcgctgttcgccgcc
ggcatcgacccgcggcgcccggcaggaagcatctcgcgagcgcgttacctgaaactgggc
gaggaagtccgacggatactggcgatggccatcgagcgcggcggcacgaccctgcgcgac
ttcgtcggcggcgacggcaagcccggttacttccagcaggagctgttcgtctacggacgg
gccggcgaattctgcaagagctgcggctcgaccctgcgcgagattcgtctcggtcagcgc
gccagtgtctattgcagccgttgccagcgttga
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