Stutzerimonas stutzeri RCH2: Psest_0344
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Entry
Psest_0344 CDS
T02391
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psh
Stutzerimonas stutzeri RCH2
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psh03009
]
Psest_0344
Enzymes [BR:
psh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Psest_0344
Ribosome biogenesis [BR:
psh03009
]
Prokaryotic type
rRNA helicases
Psest_0344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AGA84955
UniProt:
L0GHR7
LinkDB
All DBs
Position
complement(367174..368553)
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AA seq
459 aa
AA seq
DB search
MPSTAFSSLPLSAAMLANLDALGYAAMTPIQAQSLPVMLKGHDLIAQAKTGSGKTAAFGI
ALLEPLNPRYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLCGGVSIGPQIASL
EHGAHVIVGTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPARRQ
TLLFSATYPAGIKQLSASFMRDPQQVRAEALHDDAQIEQRFYEIDPEQRMEAVTRLLASF
RPESCVAFCFTKQQCQELVDHLSANGISAMALNGDLEQRDRDQVLAMFANRSLSVLVATD
VAARGLDIDALDMVINVELARDAEIHVHRVGRTGRAGNQGLAVSLVAPAEAHRAQAIEKL
QQAPLNWQPLDGLKPKGGAPLQPPMATLCIGAGRKDKLRPGDILGALTGDAGIPGTQVGK
IAIFDFQAFVAVERGVVKQALKRLNEGKIKGRSLKVRVL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagtaccgccttttcttccctgcccctttctgccgccatgctggccaacctcgac
gccctcggctacgcggcgatgacgccgattcaggcgcagagcctgccggtcatgctcaaa
ggccacgacctgatcgcccaggccaagaccggtagcggcaagacggccgccttcggtatc
gccctgctcgagccgctgaatccacgctatttcggctgccaggcgctggtgctgtgtccg
acacgcgaactggccgaccaggtggccaaggagctgcgccgtctggcgcgggcggcggac
aatatcaagatcctcacgctttgcggtggcgtatcgatcggcccgcagatcgcctccctc
gaacatggcgcgcatgtcatcgtcggtacgccgggccgggtgcaggaacatctgaagaag
ggcacgttgaagctcgacgggctgaacactctggtactcgatgaagccgaccgcatgctg
gacatgggcttctacgacgccatcgccgagatcatcggccagacgccagccaggcggcag
accctgctgttttccgctacctaccccgccggcatcaaacagctttccgcgagtttcatg
cgcgacccgcaacaggtgcgcgccgaagcgctgcacgatgatgcgcagatcgagcagcgc
ttctacgaaatcgaccctgagcagcgcatggaggcagtaacgcgcctgctggccagcttc
cgtccggaaagctgcgtggccttctgcttcaccaagcagcaatgccaggagctggtcgat
catctgagcgccaacggcatctcggccatggcgctgaacggcgacctcgagcaacgcgac
cgcgaccaggtgctggcgatgttcgccaaccgcagcctgtcggtgctggtggcgaccgat
gtcgcggcgcgcgggctggatatcgacgcgctggacatggtgatcaacgtcgagctggcg
cgcgatgcggaaatccatgtgcaccgggttggccgcacgggccgcgccggcaatcagggc
ctggccgtgagcctggtcgccccggctgaagcgcatcgcgcgcaggccatcgaaaaactg
cagcaggcgccgctcaactggcagccgctggacggccttaagcccaagggcggtgcgccg
ttgcagccgccgatggctaccctgtgcatcggcgccgggcgcaaggacaagctgcgccca
ggcgacatcctcggggcattgacgggcgatgccggcattcccggcacccaggtcggcaag
atcgccatcttcgatttccaggcgttcgtcgccgtcgagcgcggtgtggtcaagcaggcg
ctcaagcgcctcaatgaaggtaagatcaagggccgctcgctgaaagtacgcgtgctctga
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