Stutzerimonas stutzeri RCH2: Psest_0349
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Entry
Psest_0349 CDS
T02391
Name
(GenBank) DNA polymerase III, alpha subunit (gram-positive type)
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03030
DNA replication
psh03430
Mismatch repair
psh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psest_0349
03430 Mismatch repair
Psest_0349
03440 Homologous recombination
Psest_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psh03032
]
Psest_0349
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_0349
Enzymes [BR:
psh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psest_0349
DNA replication proteins [BR:
psh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psest_0349
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psest_0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AGA84960
UniProt:
L0GHS3
LinkDB
All DBs
Position
complement(372795..373502)
Genome browser
AA seq
235 aa
AA seq
DB search
MSMFWFNSRGPKLPPEQQQRIDELPLPLAPQTVPLRQQRLVVLDLETTGLHLKRDLVIAI
GAVVIEDGAIDYSQQFECTLCRQVKVTESVLIHGIAPSELANGLPPAEALLSFMEFAAGS
VILAFHAPFDQRMLGRALKRELGYTMDHTFLDVADLAPMLFPEAMIHRGGLDHWLDYFNI
HIPQRHNASADAMATAEIALILLHRAQRVGLTSLDELAQRLRCWQRARKAAFNSI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttctggttcaactcacgcggcccgaagctgccccccgagcagcaacagcgc
attgacgagctgccgcttccccttgcgccgcagacggtcccgttgcggcaacagcgccta
gtggtgctggacctggaaaccaccggcctgcacctcaagcgcgatctggtcatcgctatt
ggcgcagttgtcatcgaagacggtgccatcgactattcccagcagttcgaatgcacgctg
tgccgtcaggtgaaggttaccgaaagcgtgctcatccacggcatcgcgccgagtgagctg
gccaacggcctgccaccagccgaagcgctgctcagcttcatggagtttgctgccggcagc
gtgatccttgcctttcacgcaccgttcgaccaacgcatgctcggccgcgcgctgaaaaga
gagctgggctacacgatggaccacacattcctcgatgtggccgatctcgcacccatgcta
tttcctgaagcgatgatccatcgcggcggcctggatcactggctcgactacttcaatatc
catatcccgcaacgccacaacgcatcagccgatgccatggcgaccgcagagatcgccctg
atcctgctgcaccgcgcacaacgggtgggcctgaccagcctcgacgaactggctcagcgg
ctcagatgctggcaacgcgcacgcaaggccgcattcaattcgatctga
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