Stutzerimonas stutzeri RCH2: Psest_0627
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Entry
Psest_0627 CDS
T02391
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03420
Nucleotide excision repair
psh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psest_0627
03430 Mismatch repair
Psest_0627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_0627
Enzymes [BR:
psh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psest_0627
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psest_0627
MMR (mismatch excision repair)
Other MMR factors
Psest_0627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
UvrD_C
AAA_19
UvrD_C_2
KdpD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGA85226
UniProt:
L0GGT6
LinkDB
All DBs
Position
678172..679356
Genome browser
AA seq
394 aa
AA seq
DB search
MPNELWVAGAGSGKTHKIITEAIETIKAGGRVLVVTYTTNNQAELRSRFVELYGASSEHF
VVKGLFSFYLEDMVRPYQSEVFPDRITTISFTENNPHLISGTTYYIEGRAEKSEDGTINP
LHYLTPCKTKAYSGFLAKLATLIAKLSKNAPAKRLKEIYQRVYFDEVQDLVGWDYDVIKS
LNKVMVDSICCVGDFRQTIYTTTFGHKAPQTPQQKVDYFVGKMKFEKHSMPKNRRCIQEI
CDLSDTIHLGLYDKTVTGVEKVPDEISHHHGTFIVKQSQVSDYLAAFQPQVLRWSSTTGT
GYLPGNLICYTFGSCKGLGFDRVLVIPSDKHLKFIGGNAKVFDKDKTEESRNKLYVAITR
ARYSLAFLVEDKKVKGLPYPIWDGSGALNAVIEK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaacgaactctgggtcgcaggcgccggatcagggaaaacgcacaagatcattact
gaagccattgagaccatcaaggctggtggacgtgtgcttgtagtcacctatacaaccaat
aatcaggcagagttgcgctctcgttttgttgagttgtacggtgctagcagtgagcacttc
gtcgtcaaggggctgttctctttttacctggaagatatggtgcgtccctatcagagcgag
gtatttccagatcggatcacgactatctcgttcactgagaacaaccctcacttaatatca
ggtacaacctactacattgaaggcagagctgaaaaatcggaagatggcacgatcaatcca
ctgcattacctgacgccctgcaaaacaaaggcgtactccgggtttttggcaaagcttgcg
accctcattgcgaaactatccaaaaatgcccctgccaagcggttgaaggagatttatcaa
agggtctattttgatgaagtgcaggatttggtcggttgggactacgacgtgatcaaatca
ctcaacaaggtcatggtcgactcgatctgttgtgtgggcgactttcgacagacaatctac
acaacgacgttcggccataaggctccgcagacgcctcaacagaaggtcgattacttcgtc
gggaaaatgaagttcgaaaagcattcgatgccgaagaatcgcaggtgcatacaagaaatc
tgcgacctctccgacacgatccacctggggctgtatgacaagacggtaacaggtgtcgag
aaagtgccagacgaaatatcgcatcaccatggcaccttcatagtgaaacaatctcaggtg
agcgattacttggcagcgtttcagcctcaagtactgcgctggtcgtccaccaccggcact
ggatacctaccgggtaaccttatctgttatacgttcggttcctgcaaaggcttaggcttt
gatcgagtgcttgtgatcccgtcagataaacatctgaagttcattggcggaaatgccaaa
gtgttcgacaaggataagacggaggagtcgcgaaacaagctatacgtcgcgattacccgc
gcgcgctatagcctggccttcctcgtcgaggataagaaggtgaaagggctcccttacccc
atatgggatggctctggcgcgctcaatgcagtgatcgaaaagtga
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