Stutzerimonas stutzeri RCH2: Psest_0986
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Entry
Psest_0986 CDS
T02391
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psest_0986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psh03019
]
Psest_0986
03016 Transfer RNA biogenesis [BR:
psh03016
]
Psest_0986
Enzymes [BR:
psh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Psest_0986
Messenger RNA biogenesis [BR:
psh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Psest_0986
Transfer RNA biogenesis [BR:
psh03016
]
Prokaryotic type
tRNA degradation factors
Psest_0986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGA85560
UniProt:
L0GJJ2
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All DBs
Position
1067153..1069258
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVAVTGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAVSGIPFDGPIGAARVAFHPETGYLLNPNYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVEELAAEAGKPRWDWTAPQAN
TALLDAIRAEFGEAISQAYTITIKQDRYARLGELKDQVVAKFSGEEGQPSAGEVKDAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEQALEQALEARLNILGQMNQ
VIAQSRSELSANAPTMIAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDQRI
EKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtaatcaagaagtttcaattcggtcagtcgaccgtaaccctggaaacgggt
cgtatcgcccgccaggcctccggcgcagtgctggtcaccgtcgatgacgacgtgaccgta
ctggtcgctgtcaccggcgccaagaccgccgacccgagcaagggctttttcccgctctcg
gtccactaccaggaaaagacctacgcagccggcaagatccccggcggattcttcaagcgt
gaagcgcgtccttccgaaaaggaaaccctgacctcgcgtctgatcgatcgtccgatccgt
ccgctgttcccggaaggtttccagaacgaagtgcaggtcatctgtaccgtcgtttccacc
agcaagaagactgacccggacatcgccgcgatgatcggtacttcggccgctctggctgtt
tccggcattccgttcgacggcccgatcggtgctgcacgcgtggctttccacccggaaacc
ggctacctgctgaacccgaactacgagcagctcaaggcctccagcctggacatggtcgta
gccggcaccaaggacgctgtactgatggtcgaatcggaagccaaagagctgaccgaagat
cagatgctgggcgccgtcctgttcgcccacgacgagttccaggctgtgatcaaggcggtc
gaagagctcgccgctgaagccggcaagccgcgctgggactggaccgctccgcaggccaat
accgcactgctggacgccatccgtgccgagttcggcgaagccatctcccaagcctacacc
atcaccatcaagcaggaccgctatgcgcgcctaggcgagctgaaggaccaggtcgttgcc
aagttctccggtgaagaaggccagccgtctgctggcgaagtgaaggatgcattcggtgag
atcgaataccgcaccgttcgcgagaacatcgtcaatggcaagccgcgcatcgatggtcgc
gacacccgcaccgtccgcgggctgaacatcgaggtcggcgtactcgacaagacccacggt
tcggcgctgttcacccgtggtgaaacccaggctctggtagttgccactctcggcaccgcc
cgtgacgcacagctgctcgacaccctggaaggcgagaagaaagaccccttcatgcttcac
tacaacttcccgccgtactcggtgggcgagtgtggtcgcatgggcgctaccggtcgccgt
gaaatcggtcatggtcgtctggcccgtcgtggcgtcgccgccatgctgccgagcgctgac
gaattcccctacaccatccgtgtagtgtcggaaatcaccgaatccaacggttcgtcctcc
atggcttccgtctgcggtgcttccctggccctgatggacgctggtgtgccgatgaaggct
ccggtggccggtatcgccatggggctggtcaaggaaggcgagaagtttgccgttctgacc
gacatcctcggtgacgaagatcacctgggcgacatggacttcaaggtcgccggtaccgcc
aagggcgtgaccgcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
gagcaggcgctggagcaggctctggaagctcgcctgaacatcctcggccagatgaaccag
gtcattgcccagtcgcgtagcgagctgtcggccaacgcgccgaccatgatcgccatgaag
atcgaccaggacaagatccgcgacgtgatcggcaagggcggcgctaccattcgcgctatc
tgcgaagagaccaaggcctcgatcgacatcgaagacgatggctcgatcaagatcttcggc
gagaccaaggaagcggcagaagcggccaagcagcgcgtgctgggcatcactgccgaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcgttcgta
aacatcctgcctggcaaggacggcctggtgcacatctcgcagatcagcgaccagcggatc
gagaaagtcaccgacgtgctgaaggaaggccaggaagtgaaggttctggtactggacgtg
gacaaccgcggacgtatcaagctgtccatcaaggacgtagccgccgcggaagcgtctggc
gtctga
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