Stutzerimonas stutzeri RCH2: Psest_0998
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Entry
Psest_0998 CDS
T02391
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psest_0998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psh03019
]
Psest_0998
Enzymes [BR:
psh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Psest_0998
Messenger RNA biogenesis [BR:
psh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Psest_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AGA85572
UniProt:
L0GIG8
LinkDB
All DBs
Position
complement(1080460..1081854)
Genome browser
AA seq
464 aa
AA seq
DB search
MLKKLFQSFRLPLRRIPHPRRTPEILSSRQHSLHRNEISRYAVSVVERLQQAGYEAYVVG
GCVRDLLLQLNPKDYDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPEEDDDDASHLASRNESGRILRDNIYGTLEDDAQRRDFTINALYYDPTTERILDHTRGV
HDIRNRLIRLIGDPEQRYQEDPVRMLRAVRFAAKLDFEIERHSAEPIVELADLLDGIPSA
RLFDEVLKLFLGGKAERTFELLLEYDLFAPLFPASAAALERDPEYAGTLIRNALANTDLR
IQQGKPVTPAFLFAALLWPALPARVLELQNRGMPPIPAMQEAAHDIIWEQCQRTAIPKRF
TMPMREIWDMQERLPRRQGRRADQLLENPRFRAGYDFLLLRESAGEQTGGLGDWWTDYQE
ASESERRNMIRGLSNKDDAGAAKKRRRGGRRRRAPGDNTAAPAE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaagctgttccagtcttttcgtcttcctctgcgccgtatcccgcatccccgc
cgcacacctgaaattctgtccagcaggcagcactccctgcaccgcaacgagatcagccgt
tacgcggtgagcgtggtcgagcgcctgcagcaggcaggttacgaggcttatgtggtgggc
ggttgcgtgcgcgatctgctgctgcagctgaaccccaaggattacgacgtcgccaccagc
gcgacgcccgagcaggtgcgcgcggagttccgcaacgcgcgggtgatcggccgacggttc
aagctggtgcacgtgcatttcggccgcgagatcatcgaggtcgccactttccgcgccaat
catccagaagaggatgacgacgacgccagccatctggcctcgcgcaatgagagcggacgc
atcctgcgcgacaacatctacggcaccctcgaggatgatgcccagcgccgcgacttcacc
atcaacgcgctgtactacgatccgaccacggagcgcatcctcgatcacacccgtggcgtg
cacgacatccgcaatcgcctgatccgcctgatcggcgaccccgagcagcgctatcaggaa
gacccggtgcgcatgctgcgtgccgtgcgcttcgccgccaaactcgacttcgagatcgaa
cggcacagcgccgagcccatcgtcgaactggccgacctgctcgacggcattccctcggcc
cgcctgttcgacgaagtcctcaagctgttcctcggcggcaaggccgagcgcaccttcgag
ctgctgctcgaatacgaccttttcgccccgctgttcccggcgagcgcggcagcactggag
cgcgacccggagtatgccggcacgctgatccgcaacgctctggccaataccgatctgcgg
atccagcagggcaagccggtaacgcctgcgttccttttcgccgccctgctctggcctgcc
ctgccggcccgcgtgctggaactgcagaaccgcggcatgccgccgatcccggcgatgcag
gaggccgcgcacgacatcatctgggaacagtgccagcgcaccgcaatccccaaacgcttc
accatgcccatgcgcgagatctgggacatgcaggagcgtctgccgcggcgccagggccgg
cgtgccgaccagctgctggaaaatccacgtttccgtgccggttacgacttcctcctgctg
cgcgagagtgccggcgagcagaccggcgggctcggagactggtggaccgattatcaggag
gccagcgaaagcgagcggcgcaacatgattcgcgggctcagcaataaagacgatgccggc
gcagcgaagaagcgccgccgtggcgggcgtcgccgccgggctccgggcgacaataccgcc
gccccggccgagtaa
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