Stutzerimonas stutzeri RCH2: Psest_1544
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Entry
Psest_1544 CDS
T02391
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03410
Base excision repair
psh03430
Mismatch repair
psh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psest_1544
03430 Mismatch repair
Psest_1544
03440 Homologous recombination
Psest_1544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_1544
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Psest_1544
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psest_1544
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Psest_1544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AGA86094
UniProt:
L0GL94
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All DBs
Position
1642565..1644280
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AA seq
571 aa
AA seq
DB search
MRIEPRPLPEQLPDLGELPPLLQRLYAARGVTCAEELDKGLARLIPYKQLKGIDAAVELL
VEALEKRQRILFVGDFDADGATASTVGVLGLRQLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPDLLVTVDNGISSVDGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPNQPECAF
PSKCIAGVGVIFYVLLALRARLRELDWFVRQGWAEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARAGLRAILEVAGRDHRRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCEDEALARDMAVQLDELNKDRKSIEQGMQREALAQLKDLPLEDLPFGLCLFEADWH
QGVIGILASRLKERYHRPTIAFADAGDGLLKGSARSVPGFHIRDALDAVAAKHPGLISKF
GGHAMAAGLSLPQANFGAFAAAFDAEVRRQLCEEDLTGRLLTDGQLSVEEFHLELARALR
NAGPWGQHFPEPMFHGVFQLVQQRIVGERHLKLVLKSECGSLTLDGIAFNVDREIWPNPT
VRWAELAYKLDVNEYRGQESVQLMVAHIAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgcccgagcagctgcccgaccttggcgaactgccgccg
ctgctgcagcgcctctacgcggcccgtggcgtgacctgcgcagaggagctggacaagggg
ctggcgcggttgattccttataagcagctcaagggcatcgatgcggcggtggagctgctg
gtcgaggcgctggaaaagcgccagcgcatcctgttcgtcggcgatttcgatgccgatggc
gccacggccagcaccgtaggtgtacttggtctgcgtcagctgggggcggcgcatgtcgat
tacctggtgcccaatcgcttcgaatatggctatggcctgaccccggaaatcgttgcggtc
gccttgcagcgcgagcccgatctgctggtgacggtggacaacggcatctccagtgtcgac
ggcgtggcggccgccaaggccgcagggctcaaggtgctggtcacggaccatcacctgccg
ggtcacgaactgccggcggcggatgccatcgtcaatcccaaccagcctgagtgtgccttt
ccgagcaagtgcatcgccggggtcggggtcatcttctatgtgctgctggcgttgcgcgcg
cgtctgcgtgagctggactggttcgtccggcagggctgggccgagccgaacctcgccgag
ctgctcgacctggtagcgctgggcagcgtcgccgacgtggtgccgctggatgccaacaac
cgcatcctggtccatcagggtttggcgcggattcgcgccgggcgggcgagggcagggctg
cgggcgattctcgaggtggccgggcgcgatcatcgacgcatcacctccaccgatctgggc
ttcattctcggaccgcgactcaacgcggccgggcggctggacgacatgtcgctgggcatc
gaatgcctgctctgcgaggacgaggcgctggcgcgcgatatggcggtccagctcgatgag
ctgaacaaggaccgcaagagcatcgagcagggcatgcagcgcgaggcactggcgcagctg
aaggatctgccgctggaggacctgccgttcggcctgtgcctgttcgaggcggactggcac
cagggcgtgatcggcatcctcgcctcgcgcctcaaggagcgctaccaccgcccgaccatc
gccttcgccgatgctggcgatgggctgctcaagggctcggcgcgctcggtgccgggcttt
cacatccgcgatgcgctggatgcggttgccgccaagcatcccggcctgatcagcaagttc
ggcgggcacgccatggcggccgggctgtcgctgccacaagcgaacttcggtgccttcgcc
gcggccttcgatgccgaagtgcgtcgccagctgtgcgaggaagatctcaccggccggttg
ctcaccgacggccagctcagcgtcgaggagtttcacctggagctggcccgcgcactacgc
aacgccgggccctggggtcagcattttcccgagccgatgttccatggggtattccagctg
gtgcagcagcgtatcgtcggcgagcgccatttgaagctggtgctgaagagtgaatgcggc
tcgctgaccctcgatggcatcgccttcaacgtcgaccgcgaaatctggccgaatccgacg
gtgcgctgggcggagctggcctacaagctggacgtcaacgagtatcgcggccaggaaagc
gtgcaactgatggtggcgcatatcgccccgcgctga
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