Stutzerimonas stutzeri RCH2: Psest_1627
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Entry
Psest_1627 CDS
T02391
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psh
Stutzerimonas stutzeri RCH2
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psh03009
]
Psest_1627
Enzymes [BR:
psh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Psest_1627
Ribosome biogenesis [BR:
psh03009
]
Prokaryotic type
rRNA helicases
Psest_1627
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGA86177
UniProt:
L0GK65
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All DBs
Position
1729244..1730575
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AA seq
443 aa
AA seq
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MFDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLN
RLIGDAVVRTDVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAVLRK
VPDILIGTPGRMIEHLNAGTLILKDVEMLILDEADRMLDMGFAEDVQRLVGECAKRQQTL
LFSATSGGSALREMTASVLRDPLHLQLNRISELSEGTRQQIITAEDTAHKEKLVHWLLAN
ETYKKAVIFTNTRVQADRLYGRLVAEGVKAFVLHGDKDQKDRKLAIDRVKEGGVKVLVAT
DVAARGLDIEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHNDWNLMSSIER
YLKQRFEHRVVKGLKGSYMGPKNLKASGKAAGPKKKKDDKKKDDKKKAKPTAKRPKNAKR
EAPSPVVSQDGMAPLKRKKPTAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaccaattcgccctgcacgaacgcctgctcaaggccgtcgccgaactcaaattc
gtcgagccgaccccggtgcaggtagcggcgattccgccggcgctggaagggcgtgaccta
cgcgtgacggcacagaccggcagcggcaagaccgccgcgttcgtcctgccgatgctcaac
cgcctgattggcgatgcggtggtgcgtaccgacgttcgcgcgctgattctgctgccgacc
cgggagctggcgcagcagacgctcaaggaggtcgagcgcttttcgcagttcaccttcatc
aagtcggcgatgatcaccggcggcgaggatttcaaggttcaggcagcggtgctgcgcaag
gtgccggacatcctcatcggcacgccgggacggatgatcgagcacctgaatgccggcacg
ctgatcctcaaggacgtcgagatgctgatcctcgacgaagccgatcgcatgctcgacatg
ggattcgccgaggacgtgcaacgtctggtgggcgagtgcgccaagcgccaacagaccctg
ctgttctctgcaaccagcggcggctcggcactgcgcgagatgaccgccagcgtgctgcgc
gatccgctgcacctgcagctcaaccgcatcagcgagctgagcgagggcacccgccagcag
atcatcaccgccgaggacaccgcgcacaaagagaagctggtgcactggctgctggccaac
gaaacctacaagaaggcggtcatcttcaccaatacccgcgtgcaggctgaccgcctctat
gggcgcctggtggcagaaggcgtgaaggcgttcgtgctgcacggtgacaaggaccagaag
gaccgcaagctggctatcgaccgggtcaaggaaggcggcgtcaaggtgctggttgcgacc
gatgtcgcggcccgcggcctggacatcgaaggcctggatctggtgatcaacttcgatatg
ccgcgctccggcgacgaatacgtgcaccgcatcggtcgtaccgggcgcgctggcgccgag
gggctggcgatctcgctgatctgccacaacgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagcgcttcgagcatcgagtggtcaagggcctgaagggcagctacatgggg
ccgaagaacctcaaggcctccggtaaggcggccggcccgaagaagaaaaaggacgacaag
aagaaagatgacaagaagaaggccaagcccaccgccaagcgtccaaagaacgccaagcga
gaagccccatcaccggtggtgagtcaggacggcatggcgccgctcaagcgcaagaagccg
acggccgaatga
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