Stutzerimonas stutzeri RCH2: Psest_1862
Help
Entry
Psest_1862 CDS
T02391
Name
(GenBank) VCBS repeat-containing protein
KO
K20276
large repetitive protein
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psest_1862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AGA86408
UniProt:
L0GI28
LinkDB
All DBs
Position
1966383..1973558
Genome browser
AA seq
2391 aa
AA seq
DB search
MPFAQCLDDRSFRAVRDNAPAVQHDQAFDQAEHGHAMGNQQHCLALGPAQQVMPQCVLTA
VVHGTGRLVEQQNRWVEQQGARHQHQLPLAARQQLAAFANRSVEAERVLSCQFIGAGELG
HFKHALIADVACTHGHVVAQAAGQQRHVMRDIADLAAQVRDVDTGNVLVNDLPGTDGGIS
VVTIGTQQGLYGQLILGADGTYTYVLNTGLAVVQGLDSGETLTETFAYTMQDADGDPSSA
QITITITGSNDAPTLSVIGAQVFEAGLATGSDAGANSEFAYGTFTLGDVDGLDDIQSVSI
NGTAVAIGSLVGSSFAGAHGTLTVTGYDVLTGIATYQYQLTSPTTDVADVAETDTFAVSV
SDGTASASANLVIDIVDDVPTAANDAFSLSEDTASVIGNVLSNDTIGADVSGTVTTTGNQ
TGSYGQLTLNADGSFSYVLNTGLAVVQGLDSGEILTETFNYTMQDADGDPSSAQITITIT
GSNDAPSLSVIGAQVFESGLAAGSDASANSEFAYGTFTFGDVDGLDDIQSVSINGTAVAI
GSLVGSSFAGAHGTLTVTGYDVLTGIATYQYQLTSPTTDVADVAETDTFAVSVSDGTASA
SANLVIDIVDDVPTAANDAFSLSEDTASVIGNVLSNDVSGADVSATVSSTGNQTGSYGQL
TLNADGSFSYVLNTGLAVVQGLDDGEQLSETFSYTMQDADGDPSTAQLTIIITGSNDEPS
LSVIGAQVFESGLATGSDASANSEFAYGTFTIGDADGLDDIQSVTINGTTVAIGLLVGSS
FAGAHGTLTITGYDVLSGIATYQYQLTSPTTDVAGVDESDTFSLSVSDGTASASGNLVID
IVDDVPSAANDAFSLSEDTASVIGNVLSNDVSGADVSATVSSTGNQTGSYGQLTLNADGS
FSYVLNTGLAVVQGLDDGEQLSETFSYTMQDADGDPSTAQLTIIITGSNDEPSLSVIGAQ
VFESGLATGSDASANSEFAYGTFTIGDADGLDDIQSVTINGTTVAIGLLVGSSFAGAHGT
LTITGYDVLSGIATYQYQLTSPTTDVAGVDESDTFSLSVSDGTASASGNLVIDIVDDVPS
AANDAFSLSEDTASVIGNVLSNDVSGADVSATVSSTGNQTGSYGQLTLNADGSFSYVLNT
GLAVVQGLDDGEQLSETFSYTMQDADGDPSTAQLTIIITGSNDEPSLSVIGAQVFESGLA
TGSDASANSEFAYGTFTIGDADGLDDIQSVTINGTTVAIGLLVGSSFAGAHGTLTITGYD
VLSGIATYQYQLTSPTTDVAGVDESDTFSLSVSDGTASASGNLVIDIVDDVPSAANDAFS
LSEDTASVIGNVLSNDVSGADVSATVSSTGNQTGSYGQLTLNADGSFSYVLNTGLAVVQG
LDDGEQLSETFSYTMQDADGDPSTAQLTIIITGSNDEPSLSVIGAQVFESGLATGSDASA
NSEFAYGTFTIGDADGLDDIQSVTINGTTVAIGLLVGSSFAGAHGTLTITGYDVLSGIAT
YQYQLTSPTTDVAGVDESDTFSLSVSDGTASASGNLVIDIVDDVPSAANDAFSLSEDTAS
VIGNVLSNDVSGADVSATVSSTGNQTGSYGQLTLNADGSFSYVLNTGLAVVQGLDDGEQL
SETFSYTMQDADGDPSTAQLTIIITGSNDEPSLSVIGAQVFESGLATGSDASANSEFAYG
TFTIGDADGLDDIQSVTINGTTVAIGLLVGSSFAGAHGTLTITGYDVLSGIATYQYQLTS
PTTDVAGVDESDTFSLSVSDGTASAFSNLVIGVVDDMPSLGAFTTAIIPNEIGTVNGTFS
VVSGADGLDGFQIAGPAIAGLNYTTVHSYDGAGNFLSTTLTGLTSSNQTVFSLTVSANGT
YVFNLVQPEAASELTYSLSNLAPGHVPGFAETPDGLIEFSSPGAVNSSTQGFGINNQFFD
RGEQFTMEFHAAGVPGVDNDPATDVRLVNKVVLVNDQVNGELTIRWTATNSQTGESRSGT
MTITGAMAETVIDPDISFNQLQIEGIAGNGRVRFATTTISTLVLPEDQSLAFDVVAQDGD
GDLSGSSTLNVQVVAEDSPTSFVLEGTAGDDVIAASNLTDIIDGKAGFDIVDYGDDTAGI
AASLALAAGLSGTALGDSYSSIEGLMGGSGNDQLSGDSQANYLAGGAGDDILQGGAGDDV
LVGGLGDDVLSGGEGDDVLVGDPGSDQLLGGEGFDTVDYSADTAGVTVNLETGIGEGGLA
EGDTYNSIEGILGGAGNDTLTGDGGDNYLDGGAGNDTLLGGAGDDILVGGVGDDTLTGGA
GRDSFVWRVGDEGGTDTITDFQIDPAGTNTDVIDLSQLLVGVTEDAATLGDYLDFAFGGG
STTISVSLTPGGAPVQDITLSGIDLSTIYGTDVADVISGMIDDGALKVDNG
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgcgcaatgcctcgatgaccgcagctttcgggccgtccgcgacaacgcgccc
gcagtccagcacgaccaggcgttcgaccaggctgagcatggacatgcgatgggtaatcag
cagcattgtcttgccttgggaccagcccagcaggtgatgccgcagtgcgtcctcactgct
gttgtccatggcactggtaggctcgtcgagcagcagaatcggtgggtcgagcagcagggc
gcgcgccatcagcaccagctgccgttggccgccagacaacagctggccgcgttcgccaac
aggtcggtcgaagccgagcgggtgctgtcttgccaattcataggcgccggtgagcttggc
cacttcaagcatgcgctcatcgctgacgtagcgtgcacccatggtcatgttgtcgcgcag
gctgccggccagcagaggcatgtcatgcgagacatagccgatctggctgcgcaggtccgc
gacgtcgatactggtaacgttctggtcaacgatctgccagggaccgacggcggcatttcg
gtcgttacgattggcacgcagcaaggtctctacggtcagctgatcctgggcgctgacggt
acctatacctacgtgctcaataccggccttgcggttgttcagggcctggacagcggtgaa
acactgaccgagaccttcgcctacaccatgcaggacgccgacggagacccgtcgagcgcg
cagatcaccatcaccatcaccggcagcaacgatgcgccgacgctgagcgtgatcggtgcc
caggtgttcgaggctggccttgcgaccggttccgatgccggcgccaacagcgagtttgcc
tacggcaccttcaccctcggtgatgtggatggtctggacgatatccagagcgtcagcatc
aacggcacggctgtggccatcggcagcctggtcggcagcagcttcgccggtgctcacggc
accctgacggtcaccggctatgacgtgctgaccggcatcgccacctatcagtatcagctg
accagtccgaccaccgacgtggccgacgtcgctgaaaccgatacctttgcggtgagcgtt
tcggacggcacggcatcggcttcggcgaacctggtgatcgacatcgtcgacgacgtacca
actgcggccaacgatgccttcagcctcagtgaagacacggccagcgtgatcggcaacgtg
ctgagcaacgacaccatcggtgccgacgtcagcggcacggtcaccactaccggcaaccag
actggcagctatggccagctgacgctcaatgccgacggtagcttcagctacgtgctcaat
accggcctggccgtggtgcagggcctggacagcggtgaaatactgaccgagaccttcaac
tacaccatgcaggatgccgacggcgacccgtcgagcgcgcagatcaccatcaccatcacc
ggcagcaacgacgcgccgagcctgagcgtgatcggggcccaggtgttcgagtccggcctg
gccgctggctccgatgccagcgccaacagcgagttcgcctacggcaccttcacctttggt
gatgtggatggtctggacgatatccagagcgtcagcatcaacggcacggctgtggccatc
ggcagcttggtcggcagcagtttcgccggtgctcacggcaccctgacggtcaccggctat
gacgtgctgaccggcatcgccacctatcagtatcaactgaccagcccgaccaccgacgtg
gccgacgtcgctgaaaccgatacctttgcggtgagcgtttcggacggcacggcatcggct
tcggcgaacctggtgatcgacatcgtcgacgacgtaccaactgcggccaacgatgccttc
agcctcagtgaagacacggccagcgtgatcggcaacgtgctgagcaacgacgtcagcggc
gcagatgtcagcgctactgtcagcagtaccggcaaccagactggcagctatggccagctg
acgctcaatgccgacggtagcttcagctacgtgctcaataccggcctggcggtagtacag
ggtctggacgatggcgagcaacttagtgagaccttcagctacaccatgcaggacgccgac
ggtgacccgtccacggcgcagttgaccatcatcatcaccggcagcaacgatgagccaagc
ctgagcgtgatcggtgcccaggtgttcgagtctggcctggccactggctccgatgcctct
gccaacagtgagtttgcctacggcaccttcaccattggtgatgcggatggcctggacgat
atccagagtgtgaccatcaatggcactacggttgccataggcttgttggtcggcagcagc
ttcgctggcgctcatggcaccctgacgattaccggctacgacgtattaagtggcatcgcc
acctatcagtatcagctgaccagtccgaccaccgatgtagccggtgtggacgaaagcgat
accttcagccttagcgtgtccgatggcacggcctcggcctccggcaacctggtgatcgac
atcgtcgacgatgtaccgagtgcggccaacgatgccttcagcctcagcgaagacacggcc
agcgtgatcggcaacgtgctgagcaacgacgtcagcggcgcagatgtcagcgctactgtc
agcagtaccggcaaccagactggcagctatggccagctgacgctcaatgccgacggtagc
ttcagctacgtgctcaataccggcctggcggtagtacagggtctggacgatggcgagcaa
cttagtgagaccttcagctacaccatgcaggacgccgacggtgacccgtccacggcgcag
ttgaccatcatcatcaccggcagcaacgatgagccaagcctgagcgtgatcggtgcccag
gtgttcgagtctggcctggccactggctccgatgcctctgccaacagtgagtttgcctac
ggcaccttcaccattggtgatgcggatggcctggacgatatccagagtgtgaccatcaat
ggcactacggttgccataggcttgttggtcggcagcagcttcgctggcgctcatggcacc
ctgacgattaccggctacgacgtattaagtggcatcgccacctatcagtatcagctgacc
agtccgaccaccgatgtagccggtgtggacgaaagcgataccttcagccttagcgtgtcc
gatggcacggcctcggcctccggcaacctggtgatcgacatcgtcgacgatgtaccgagt
gcggccaacgatgccttcagcctcagcgaagacacggccagcgtgatcggcaacgtgctg
agcaacgacgtcagcggcgcagatgtcagcgctactgtcagcagtaccggcaaccagact
ggcagctatggccagctgacgctcaatgccgacggtagcttcagctacgtgctcaatacc
ggcctggcggtagtacagggtctggacgatggcgagcaacttagtgagaccttcagctac
accatgcaggacgccgacggtgacccgtccacggcgcagttgaccatcatcatcaccggc
agcaacgatgagccaagcctgagcgtgatcggtgcccaggtgttcgagtctggcctggcc
actggctccgatgcctctgccaacagtgagtttgcctacggcaccttcaccattggtgat
gcggatggcctggacgatatccagagtgtgaccatcaatggcactacggttgccataggc
ttgttggtcggcagcagcttcgctggcgctcatggcaccctgacgattaccggctacgac
gtattaagtggcatcgccacctatcagtatcagctgaccagtccgaccaccgatgtagcc
ggtgtggacgaaagcgataccttcagccttagcgtgtccgatggcacggcctcggcctcc
ggcaacctggtgatcgacatcgtcgacgatgtaccgagtgcggccaacgatgccttcagc
ctcagcgaagacacggccagcgtgatcggcaacgtgctgagcaacgacgtcagcggcgca
gatgtcagcgctactgtcagcagtaccggcaaccagactggcagctatggccagctgacg
ctcaatgccgacggtagcttcagctacgtgctcaataccggcctggcggtagtacagggt
ctggacgatggcgagcaacttagtgagaccttcagctacaccatgcaggacgccgacggt
gacccgtccacggcgcagttgaccatcatcatcaccggcagcaacgatgagccaagcctg
agcgtgatcggtgcccaggtgttcgagtctggcctggccactggctccgatgcctctgcc
aacagtgagtttgcctacggcaccttcaccattggtgatgcggatggcctggacgatatc
cagagtgtgaccatcaatggcactacggttgccataggcttgttggtcggcagcagcttc
gctggcgctcatggcaccctgacgattaccggctacgacgtattaagtggcatcgccacc
tatcagtatcagctgaccagtccgaccaccgatgtggccggtgtggacgaaagcgatacc
ttcagccttagcgtgtccgatggcacggcctcggcctccggcaacctggtgatcgacatc
gtcgacgatgtaccgagtgcggccaacgatgccttcagcctcagcgaagacacggccagc
gtgatcggcaacgtgctgagcaacgacgtcagcggcgcagatgtcagcgctactgtcagc
agtaccggcaaccagactggcagctatggccagctgacgctcaatgccgacggtagcttc
agctacgtgctcaataccggcctggcggtagtacagggtctggacgatggcgagcaactt
agtgagaccttcagctacaccatgcaggacgccgacggtgacccgtccacggcgcagttg
accatcatcatcaccggcagcaacgatgagccaagcctgagcgtgatcggtgcccaggtg
ttcgagtctggcctggccactggctccgatgcctctgccaacagtgagtttgcctacggc
accttcaccattggtgatgcggatggcctggacgatatccagagtgtgaccatcaatggc
actacggttgccataggcttgttggtcggcagcagcttcgctggcgctcatggcaccctg
acgattaccggctacgacgtattaagtggcatcgccacctatcagtatcagctgaccagt
ccgaccaccgatgtggccggtgtggacgaaagcgataccttcagccttagcgtgtccgat
ggcaccgcctcggccttcagcaacctggtgattggcgttgtcgacgatatgccttcgctc
ggtgccttcaccacggcgatcattcccaacgaaataggcacggttaacggtactttttcg
gtggtctcgggtgccgatggtctggatggtttccagatcgccgggccggccattgccggg
ctgaattacacgactgtccatagttacgatggggcgggtaacttcctgagtacaactctg
actggcctcacctcgagcaaccagacggtattcagcctgacggtaagcgcgaacggcacc
tacgtgttcaacctggttcagcctgaagccgccagtgagctgacctactcgctgagcaac
ctcgcgccagggcatgtgccaggttttgccgaaactcccgatggcctgatcgagttcagc
agtccgggggcggtcaactcgtccacccagggcttcggcatcaacaatcagttcttcgat
cgtggcgaacagttcaccatggagtttcatgccgctggggtaccgggggtcgacaacgac
ccggcgaccgatgtgcggctggtcaacaaggtggtattggtcaacgaccaggtcaatggc
gagttgaccattcgctggacagcgaccaatagccagacgggtgaaagccgtagcggaacc
atgaccatcaccggagcgatggcggagacggtgatagatcccgatatcagcttcaaccag
ctgcagatcgagggtattgccggcaacggcagggtgcgtttcgccaccactaccatcagt
actttggtgctgccagaggatcagagcctggcgttcgatgtagtggcccaggatggcgac
ggcgatctcagtggctcctcgacgttgaacgtgcaggtggtcgcggaggactcgccgacc
agcttcgtgcttgaaggtactgctggcgatgatgtgatcgcggcgagcaacctgaccgac
atcatcgacggcaaggccggctttgacatagtcgattatggcgatgacacggccggtatc
gccgccagtctggcgttggccgccgggctttcgggaaccgcgctgggcgatagctacagc
tcaatcgaagggctgatggggggctcgggcaacgatcagctaagcggagatagccaagcc
aactacctggccggcggtgccggcgacgacatactgcaaggcggagcgggggacgatgtg
ctggtgggcggtctcggcgacgatgtgttgtcgggcggcgagggcgacgatgttctagtg
ggcgacccgggctcggatcaattattgggcggtgaagggttcgatactgtcgactacagc
gccgatacggccggcgtcactgtcaatctcgaaaccggcattggtgaaggcgggctggca
gaaggcgatacctacaattccatcgagggcattctcggtggtgcgggcaatgacacgctg
accggggatggcggtgataactacctcgacggtggcgccggcaacgacacgctgctgggt
ggtgccggggatgacatcttggtgggaggtgtgggtgacgacaccctgacgggaggcgca
ggtcgcgacagtttcgtctggcgtgtgggtgacgagggtgggactgacactatcaccgac
ttccagattgaccctgctggcaccaacacggatgtcatcgatctatcgcagctactcgtt
ggcgttacagaagacgcggctaccctcggtgattatctggacttcgctttcggtggcggt
tcgacgactatctcggtcagcctgacaccgggcggtgcgccagttcaggacatcaccctt
agcggtatcgacctgagcacgatctatggcaccgatgtagccgacgttatttcgggaatg
atcgatgacggggcgctgaaagtcgataacggctaa
DBGET
integrated database retrieval system