Stutzerimonas stutzeri RCH2: Psest_2995
Help
Entry
Psest_2995 CDS
T02391
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psh
Stutzerimonas stutzeri RCH2
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psh03016
]
Psest_2995
Enzymes [BR:
psh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Psest_2995
Transfer RNA biogenesis [BR:
psh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Psest_2995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AGA87494
UniProt:
L0GQB9
LinkDB
All DBs
Position
complement(3184908..3186032)
Genome browser
AA seq
374 aa
AA seq
DB search
MAIETQWVLDDEHLTHLCAEWRQLPYVAVDTEFMRVDTFYPIAGLVQVGDGRRAYLIDPL
AVHDWSAFAAVLQDNAVVKVLHACSEDLEVLLRLTGSLPQPLFDTQLAAGYLNIGFSMGY
SRLVQAVLGIELPKGETRSDWLQRPLSDMQVQYAAEDAQHLAELYEALLPKLSEDKRAWV
LEDGAELVANLQRESDPEEAYREVKQAWRLKPQQLAVLKVLTAWRERQARARNQPRNRVL
REASLWPLARTQPRDLVTLARIEDMHPRTVRQDGEALLQMIGQAAATPEQDWPAPLPEPL
PLEVSSVLKKLRAVGQHEAKVLDIAPELMLRKKTLEALLKSGYPDGPYQLPDSLRGWRRE
RMGQALLEVLEKRP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgaaacccaatgggttctggatgatgaacatctgacccacctgtgcgccgag
tggcgccaactgccctatgtggcggtggacaccgaattcatgagggtcgataccttctat
cccattgccgggctggtccaggtcggcgacggccggcgcgcttacctgatcgatccgctc
gccgtgcatgactggagcgcgttcgccgcggtgctgcaggacaacgcagtggtgaaggtg
ctgcacgcctgcagcgaggatctcgaagtgctgctgcgcctcaccggcagcctgccgcag
ccgctgttcgatacccaattggcggccggttacctgaacatcggcttttccatgggctat
tcgcgcctggtgcaggccgtgcttggtatcgaactgcccaagggcgaaacgcgctcggac
tggctgcagcggcctctgagcgacatgcaggtgcagtacgccgccgaggatgcgcaacat
ctggccgaactctacgaggcgctgttgccgaaactctccgaagacaaacgtgcctgggtt
cttgaggatggggcggagctggttgccaatctgcaacgcgagtccgacccggaggaggcc
tatcgtgaggtgaagcaggcgtggcgattgaaaccccaacaactggcggtgctgaaggtg
ctcaccgcctggcgcgagcggcaggcgcgggctcgcaaccagccgcgcaatcgcgtgttg
cgcgaggccagtctgtggccgttggcgcgcacccagccgcgggatctggtaacccttgct
cgtatcgaagacatgcatccacgcacagtgcgccaggatggcgaggccctgctgcagatg
atcggccaggcggccgcaacgcccgagcaggactggcccgcgccgctgcctgagccattg
ccgttggaggtctcgtccgtactgaaaaagctgcgcgcggtcggccaacacgaagcaaag
gtgctggatattgctccggagctgatgctgcgcaagaaaaccctcgaagcgttgctgaaa
agcggataccccgatggcccctatcaactgcccgattcgctccgtggctggcgccgcgaa
cggatggggcaggccctgcttgaagttctggaaaaacgaccatga
DBGET
integrated database retrieval system
