Stutzerimonas stutzeri RCH2: Psest_3107
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Entry
Psest_3107 CDS
T02391
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psest_3107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_3107
Enzymes [BR:
psh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Psest_3107
DNA repair and recombination proteins [BR:
psh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Psest_3107
Prokaryotic type
Psest_3107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGA87603
UniProt:
L0GLI6
LinkDB
All DBs
Position
complement(3284379..3285074)
Genome browser
AA seq
231 aa
AA seq
DB search
MTQDDRIRLEAGWKDALRDEFDKPYMRELGAFLRNEKAAGKTIYPPGPMIFNALNSTPLE
QVKIVILGQDPYHGPGQAHGLCFSVQPGVTPPPSLQNIFKELKRDLNLDIPRHGYLQSWA
EQGVLMLNTSLTVEQGIAGSHAKAGWQRFTDRIIEVVGERRPHLVFMLWGAHAQSKAKLI
DATRHLMLKSVHPSPLSAHRGFIGNGHFSRANQFLIQQGIQPIDWRLPAQV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggacgaccgcatcaggctcgaagcaggatggaaggacgcgttgcgcgatgag
ttcgacaagccgtacatgcgcgaactcggcgcgtttctccggaacgagaaggcagccggc
aagacgatctatccgccggggccgatgatcttcaatgcgctcaactcgaccccgctggag
caggtcaagattgtcattctcgggcaggatccgtaccacggtcccggtcaggctcacggc
ctgtgcttctcggtacagccaggcgtaactccaccgccgtcactacagaacatcttcaag
gaactgaagcgcgatctgaatctggacatcccacgccacggctatctgcagtcctgggcg
gagcagggggtgctgatgctcaacacgtctcttaccgtcgagcaggggattgccggctcg
cacgccaaggcgggctggcagcggttcactgaccggatcatcgaagtggttggcgagcga
cgcccgcacctggtgttcatgctatggggtgcgcacgcgcagtccaaagcaaagctgatc
gatgcgacacggcatctgatgctgaagtcggtacatccctcgccattgtcggcgcaccgg
ggattcatcggtaacgggcacttcagtcgagccaatcagtttctgatccagcaagggatt
cagccgatcgactggcgactgccggcgcaggtgtga
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