Stutzerimonas stutzeri RCH2: Psest_3505
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Entry
Psest_3505 CDS
T02391
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psest_3505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psh03019
]
Psest_3505
Enzymes [BR:
psh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Psest_3505
Messenger RNA biogenesis [BR:
psh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Psest_3505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AGA87994
UniProt:
L0GRR7
LinkDB
All DBs
Position
complement(3678403..3679728)
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AA seq
441 aa
AA seq
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MTFASLGLIDPLLRTLETLDYRKPTPVQIEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QRLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINPQMMA
LRKGIDVLVATPGRLLDLYRQNAVGFNQLQALVLDEADRMLDLGFADELDQLFSALPKKR
QTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA
EKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLVA
TDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAIE
TLINQVLPRHDELGFVPDHRVPTTTLGGQIIKKPKKPKKPKDAGGKGKIHLGNWFDESEK
PNAKPIRKVPSLGGGKPAKKR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcctccctgggcctgatcgatccgctgctgcggaccctggaaaccctcgat
taccgcaagccgacgccggtgcagatcgaagccattcccgccgtgctcaagggccgcgac
ctgatggcggcggcgcagaccggcaccggcaagaccgctggcttcgccctgccattgctg
cagcgcctgaccatggaaggcgccaaggtggcgagcaattcggtacgcgcgctggtactg
gtgccgacccgcgagctggccgagcaggtgcacgagagttttcgcgtctacgggcagaac
ctgccgctgcgcacctatgcggtgtatggcggggtcagcatcaatccgcagatgatggcg
ctgcgcaagggcatcgacgtgctggtggccacgcccggtcgcctgctcgacctctaccgg
cagaacgcggtgggcttcaaccagttgcaggcgctggtgctggacgaggctgaccgcatg
ctcgacctcggtttcgccgacgagctggatcagctgttctccgctctgccgaagaagcgc
cagacgctgctgttttccgcgaccttctccgaggcgatccggcagatggcccgcgagctg
ctgcgcgatccgctgtcggtcgaggtcagcccgcgcaacgccgcggcgaagacggtcaaa
cagtggctggtgccggtggacaagaagcgcaagagcgaactgttcctgcacctgctggcg
gagaagcgctggggccaggtgctggtgttcgtcaagacgcgcaagggcgtcgatcagctg
gtcgacgagctgcaggctgcgggcatttccagcgatgcgatccacggcgacaagccacag
gcctcgcggctgcgcgcgctggagcgcttcaaggcgggcgaagtgcaggtgctggtggcg
accgatgtcgccgcgcgcgggctggacatccatgatctgccgcaggtggtcaacttcgac
ctgccgatcgtcgccgaggattacgtacaccgcatcggccgtaccggtcgcgccggcgcc
acgggcgaagcggtttccctggtcagtgccgatgaagtcgatcagctcgccgccatcgaa
accctgatcaaccaggtgctgccgcgccacgacgagctgggcttcgtgccggaccaccgc
gtgccgaccaccacactgggcgggcagatcatcaagaagccgaagaaaccgaaaaagccc
aaggatgccggcggcaagggcaagatccatctcggcaactggttcgacgagagcgaaaag
cccaacgccaagccgattcgcaaggtaccgagcctgggcggcggcaaaccggcgaaaaag
cgctga
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