Stutzerimonas stutzeri RCH2: Psest_3540
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Entry
Psest_3540 CDS
T02391
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psh
Stutzerimonas stutzeri RCH2
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_3540
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psest_3540
Archaeal homologous recombinant proteins
Psest_3540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
ABC_tran
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AGA88029
UniProt:
L0GRU8
LinkDB
All DBs
Position
3717525..3721178
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILAIRLKNLASLAGEQVIDFTTEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDSVSPLNKVPDVEAEIGGGDERNLLRRGCGAGFAEVDFVGVDGHRYRARWEVKRAREKV
DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQAAFEAAKQAKESLTRLEQQAGGLQPLEPEQRDVLERE
HQAQLEELKKLQQQLKELEAQRQWLSELQRLENEREAARQQLQDAEDERESLTAARRILD
LFELLAPQRHRFLRQQELEPLLGKAAESLTRLQHEAQSLQQRLDSLQRQCEAAGNDLRAA
EQARQTAEPRLAQARREEERLSHLNADLASIREESAQADAAASAGEATLKQLGDQQQRAA
EQLATLTQQLETSAALQPLCVAWGGYRPRLQQAVQLAARLQQGQSELPALQAQAEAAESQ
QSLAREALDNLQRERDSELGLAEQLAGLHRQLDEWRQAERETDALQQLWAQQLTLTASQH
ELSNANSRQQAELDSLVPLGKQVRNDRDAAEQALKVTLALLERQRLARSENVEALRASLV
PGEPCPVCGSDEHPWQQTDALVASLDRHDDSEAAHAQQALQEQDQRLQELRDRHVALSTQ
LRQTQQRQSEVELQLQALAPRLLALPVHTRLLEQPEAERSQWLETQLTNLKDQIASASQR
QQQLLALQQRSETLQQAWQAAREACVEATQQLARQRDALARDSQQLDEELLAFAELLPVE
QLQRWRENPAQTFMQLDASIATRLQQLQAQTELAEELRQCEQRRSDEQLQQRHRQEKQAS
CSARLSEREKLLLACQQALRTSLGEQSSASAWQQQLDAAIQTARQAQTAIDQQLNESKLG
LTRLHSEQQNCRQRHAELAQERDALNAELASWRADHPQLDDASLAQLLHMDDQLIAEARQ
RLRENSDSLTRCRERLDGCLNRLNLHKQQQSDAPDTEQLQQRYAEQLQQCEQADQRCAET
RAQLIDDDKRRSQSQALLTQIDAARAEHQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLKIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIRV
RRQGNGQSDLQIVGGPS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgtctgaagaacctggcctcactggccggcgaacaggtcatc
gacttcaccaccgaaccgctggccagcgctggcctgttcgccatcaccgggccgacgggg
gccggcaagagcaccattctcgacgccctgtgcctggcgctcttcggcagcacaccgcgg
ctcgacagcgtctccccgctgaacaaggtccccgacgtcgaagccgagatcggcggtggc
gacgaacgcaatctgctgcgccgcggttgtggtgcagggttcgccgaggtggatttcgtc
ggcgtcgacggccaccgctaccgcgcccgctgggaggtcaagcgcgcccgcgaaaaggtc
gacggccgcctgcaggccagcagccaaagccttacggatctcgacagtggcacactcctg
gccagcggcaagaagcgcgaattcaaggagctgctcgaagcccgcctggggctgacgctg
gcgcagttcacccgcgccgtgctgctggcgcagagcgagttttccgccttcctcaaggcc
gacgacaacgagcgcggcacgctgctggaaaagctcaccgacaccggtctctacagccga
ctcggccaggctgccttcgaggccgccaagcaggcgaaggaaagcctcacccgcctggaa
cagcaggctggcggcttgcagccgctggaacccgagcagcgtgacgtactggagcgcgaa
catcaggcccagctcgaagaattgaagaagctgcaacagcagctcaaggaactggaagcc
cagcggcaatggctcagcgaactgcagcgcctggaaaacgagcgcgaagcggcacgccag
cagctgcaggacgccgaagacgagcgtgaaagcctgaccgcggcccgccgtatcctcgac
ctgttcgaactgctcgcgccgcagcgccatcgttttctgcgtcagcaggaactcgaaccc
ctgctcggcaaggccgccgaaagtctcactcgcctgcagcacgaggcgcaaagcctgcag
caacgtctcgacagcttgcagaggcagtgcgaagccgctggcaacgacctgcgcgcagcc
gaacaggcgcggcagacggccgagccgaggcttgcacaagcgcgccgcgaagaggagcgc
ctcagccatctgaacgccgacctcgcctcgatccgcgaagaaagcgcccaggccgatgcc
gcggccagcgccggcgaggcaacgctcaagcagctcggcgatcagcaacagcgcgccgcc
gaacagctggcgacgctgacgcagcaactcgagaccagcgcagcgctgcaaccgctctgt
gtcgcctggggtggctaccgcccgcgcttgcaacaggcggttcagctggcagcacgcttg
cagcagggtcagagcgaactccccgcgctgcaagcgcaggctgaggccgcggagtcgcag
caaagcctggcacgcgaggcgctggataatctgcaacgcgagcgcgacagcgaactcggg
ctggccgaacagctggccggtctgcaccgacaactcgatgaatggcgccaggccgagcgc
gaaaccgatgcgctgcaacagctctgggcgcagcagctgacgctcaccgccagccagcac
gaactgagcaacgccaacagtcgccagcaggccgaactggacagcctggtgccgctgggc
aaacaggtccgcaatgatcgcgacgctgccgagcaggcgctcaaggtcacccttgccctg
ctcgaacgccaacgtctggcacgcagcgagaatgtcgaagcgctgcgcgcgtcgctggtc
ccgggcgagccctgcccggtctgcggcagcgacgagcatccctggcagcagaccgacgcg
ctggtcgccagtctcgatcgccacgacgacagcgaggccgcgcacgcgcagcaggcgcta
caggaacaggaccagcgcctgcaggagctgcgtgaccgccacgtcgcgctcagcacgcag
ttgcgtcagacgcaacaacgccagagcgaagtcgagctgcagctgcaggccctagcaccg
cgcctgctcgccctgcccgtccacacgcgattgcttgagcagccggaagccgagcgttcg
caatggctggaaacgcagctgaccaatctcaaagaccagatcgccagcgccagccagcgt
cagcagcagttgctcgccctacaacagcgcagcgaaaccctgcagcaggcctggcaggcc
gcgcgcgaagcctgtgtcgaggcgacgcagcaactcgcccgccagcgcgacgcccttgcc
cgcgacagccaacagctcgacgaggaattgctggcctttgccgagctgctgcccgtcgaa
cagctgcagcgctggcgcgaaaacccggcgcagacctttatgcagctggacgccagcatc
gccacgcgactgcagcaactgcaggcgcaaaccgagctcgccgaggagctgcgccagtgc
gagcagcgccgcagcgacgagcagttgcaacaacgccatcgtcaggagaaacaggctagc
tgcagcgcacgactgagcgagcgcgagaaactgctgctggcctgccagcaggcgctgcgt
accagccttggcgagcaaagcagcgccagcgcctggcaacagcagctagatgcggcaatc
cagaccgcccgccaggcgcagaccgcgatcgatcagcagctcaacgagagcaagctcggc
ctgacgcgcttgcacagcgagcagcagaactgccgccagcgccatgccgaactggcgcag
gaacgcgatgcgctgaacgccgaactggcaagctggcgcgccgaccatccgcagctggac
gacgccagtctcgcccagctgctgcatatggacgaccagctgatcgccgaggcgcgccag
cgtttgcgagagaacagcgacagcctgacccgctgtcgcgagcgtctcgacggttgcctc
aaccgcctgaacctgcacaaacagcagcagagcgacgccccggataccgagcagctgcaa
cagcgctatgccgagcagctgcagcagtgcgagcaggccgatcaacgctgcgcggaaacc
cgcgcccagctgatcgacgacgacaaacgccgcagtcagagccaggcgctgctcacccag
atcgacgcggcgcgggccgagcatcagcgctgggggcgtatcgccgcgctgatcggttcc
agcgacggcggcgccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcag
cacgccaacgtgcagctgcgccaactggcgcggcgctatcggctcaagcgcggcggcagc
ccgctggggttgctggtgctggataccgaaatgggtgacgaactgcgctcggtgcattcg
ctgtccggcggcgagaccttcctcgtttcgctggccctggcgctgggcctggcatcgatg
gcgtcgagcaagctgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcagatcgccatggacgcgctggattcgctgcaggcccaaggccgcaag
gtggcggtgatcagtcacgtcgcggagatgcacgagcgcattccggtgcagatccgtgta
cggcgtcagggcaatgggcaaagcgatctgcagattgtcggggggccttcataa
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integrated database retrieval system
