Stutzerimonas stutzeri RCH2: Psest_3628
Help
Entry
Psest_3628 CDS
T02391
Name
(GenBank) birA, biotin-(acetyl-CoA-carboxylase) ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh00780
Biotin metabolism
psh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Psest_3628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psh03000
]
Psest_3628
Enzymes [BR:
psh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
Psest_3628
Transcription factors [BR:
psh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Psest_3628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
HTH_24
BPL_LplA_LipB_2
BPL_C
HTH_AsnC-type
NirdL-like_HTH
HTH_1
HTH_23
HTH_10
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AGA88111
UniProt:
L0GQ36
LinkDB
All DBs
Position
complement(3789554..3790501)
Genome browser
AA seq
315 aa
AA seq
DB search
MNRLLKLLQDGRFHSGQELGDALGVSRSAVWKHVQRLQEETSLSLYKVPGRGYRLAEPLS
LLNGEELTPQLVRFGWTLHLYDAIDSTNAEALRLLPLERTPFLVMAETQTAGRGRRGRLW
VSPFGQNLYCSLAFKVHGGARQLSGMSLAVGLAVMRALRLAGVTQVGLKWPNDVYADGRK
IAGILLELTGDPADVCHVVVGIGINVNMSSAEGIDQRWTSMKEHIGMVDRNALVVTLAEA
LKRYLERHASMGFSALKDEWEASHIWQGQKCTLSTGAHDYSGVVVGVDQQGGLRLMIEGS
ERVFNGGELSLRLDR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaataggctgttgaagttactccaagatggtcgctttcattctggtcaggagctgggt
gatgccttgggcgtaagccgtagcgcggtatggaagcatgtacagcgtctgcaggaggaa
acatccctttcgctctacaaggttccaggtcgcggctaccgcctagctgagccgctatcc
ctgctgaacggcgaagagcttacgccacagctggtgcggttcggttggactttgcatctt
tacgacgccatagactccaccaatgccgaggctttgcgtctattgccgctggaacgcacg
cccttcctagtaatggctgagacccagaccgcgggaaggggaaggaggggacgcctctgg
gttagtccctttgggcaaaatctgtactgcagtttggcgttcaaggtccacggaggggcg
cggcagctttccggcatgagtctggcggttggcttggcggtcatgcgtgcattgcgtctc
gcaggggttacgcaggtaggtttgaaatggccaaacgacgtatacgcagacggccgaaaa
attgccgggatcctgctggagctgactggtgatccggcggacgtatgccatgtagtggtc
ggtattggtatcaacgtgaatatgagcagtgccgaggggatagaccagcgttggacgtca
atgaaagagcatatcggtatggtcgatcggaacgcgctggtggttacgttggctgaggcg
ctgaagcgctatctagaacggcatgccagcatggggttctcggcgctgaaggacgaatgg
gaagccagtcatatctggcagggacaaaaatgtacgctcagtaccggagcccatgactat
tcgggtgtggtcgtgggggtcgatcagcagggcggcctgaggctcatgatcgaagggagc
gagcgcgtattcaatggtggggagcttagcttgaggctggaccgatga
DBGET
integrated database retrieval system
