Stutzerimonas stutzeri RCH2: Psest_3729
Help
Entry
Psest_3729 CDS
T02391
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psest_3729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psh03021
]
Psest_3729
03019 Messenger RNA biogenesis [BR:
psh03019
]
Psest_3729
Transcription machinery [BR:
psh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Psest_3729
Messenger RNA biogenesis [BR:
psh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Psest_3729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
AAA_25
NACHT
S1CSD-TOTE-2
AAA
Motif
Other DBs
NCBI-ProteinID:
AGA88206
UniProt:
L0GQB2
LinkDB
All DBs
Position
complement(3900545..3901804)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLEMAEQMGIDNMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSIN
YDRPENAKNKILFENLTPLFANERLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNLELQLDRRIAEKRVFPAINI
NRSGTRREELLTSEEELQRIWILRKLLHPMDESAAIEFLLDKLKDTKTNDEFFMSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagcccatcaccgaactgctggaaatggccgaacag
atgggcatcgacaacatggcccgttcgcgcaagcaggacgtgattttctccctgctgaag
aagcacgctaaaagcggcgaggaaatttccggtgatggcgtgctggagattctccaggac
ggtttcggcttcctgcgctccgcggattcttcctatctggccggcccggacgacatctac
gtctcgcccagccagattcgtcgcttcaatctgcgtaccggtgacaccatcatcggtaag
attcgcccgcccaaggaaggcgagcgttacttcgccctgctcaaggtcgactcgatcaac
tacgatcggccggagaacgcgaagaacaagatcctcttcgaaaacctgaccccgctgttc
gccaacgagcgtctgaagatggaggccggcaacggctccaccgaagacctcactggccgc
gtgatcgacctctgtgcaccgatcggcaagggccagcgtggcctcatcgttgctccgccg
aaagcgggcaagacgatcatgctgcagaacattgccagcaacatcacccgtaacaacccc
gagtgccacctgatcgtgctgctgatcgacgagcgcccggaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctccaccttcgacgagccgccgacccgccacgtg
caggtcgccgagatggtgatcgagaaggcaaagcgcctggtcgagcacaagaaggacgtg
gtcatcctgctggattccatcacccgcctagcgcgcgcttacaacaccgtgatcccgagc
tccggcaaggtcctgaccggtggtgtcgacgcccatgcgctggagaagcccaagcgtttc
ttcggtgccgcgcgcaatatcgaggaaggcggttcgctgaccattctcgccaccgcgctg
gtcgaaaccggctcgaagatggacgaggtgatctacgaggaattcaagggcaccggcaac
ctggagcttcagctcgatcgccgcatcgccgagaagcgcgtgttcccggccatcaacatc
aatcgctcgggtacccgccgcgaagagttgctgaccagcgaagaagagctgcagcgcatc
tggattctgcgcaagctgctgcacccgatggatgaaagcgccgccatcgaattcctgctc
gacaagctcaaggacaccaagaccaacgacgaattcttcatgtccatgaagcgcaagtaa
DBGET
integrated database retrieval system
