Stutzerimonas stutzeri RCH2: Psest_4219
Help
Entry
Psest_4219 CDS
T02391
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh03030
DNA replication
psh03410
Base excision repair
psh03420
Nucleotide excision repair
psh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psest_4219
03410 Base excision repair
Psest_4219
03420 Nucleotide excision repair
Psest_4219
03440 Homologous recombination
Psest_4219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psh03032
]
Psest_4219
03400 DNA repair and recombination proteins [BR:
psh03400
]
Psest_4219
Enzymes [BR:
psh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psest_4219
DNA replication proteins [BR:
psh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Psest_4219
DNA repair and recombination proteins [BR:
psh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Psest_4219
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psest_4219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGA88689
UniProt:
L0GTR6
LinkDB
All DBs
Position
complement(4398105..4400849)
Genome browser
AA seq
914 aa
AA seq
DB search
MSQAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR
QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA
AFMSYELATIKIDVPLDVEVGDLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC
EVQPEGCSIQAEAQYETLLEQADFERWLDRLKTAECFAFDTETTSIDAQRAELVGVSFAI
EPGQAAYVPLRHSYMGVPQQLELDAVLAALKPLLEDPAKTKICQHGKYDMNVLMHYGIEM
RGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFEIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVREAICPLMSGAAQLDVPL
LVEAGVGNNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcatcctggtggacggttcgtcctacctctatcgcgcctttcat
gccctgcctccattgaccacctccaccggcaagccgaccggcgcggtcaagggtgtgctg
aacatgttgctcagcctgcgccggcagtatccggacagcccgttcgccgtggttttcgac
gccaaggggccgacctttcgcgacgcgctgttcgagaactacaagtcgcaccgcccgccg
atgccggatgatctgcgctcgcaggtcgagccgctgcacgccagcgttcgcgccctcggc
atgccgctgctgtgcgtggaaggggtcgaggccgacgacgtcatcggcaccctggcccgg
cagtgcgcggcgctgggccgcgatgtggtgatctccaccggcgacaaggacatggcccag
ctggtctgcccgcacgtcaccctggtcaacaccatgaccggcagcgtctatgacatcgaa
ggcgtgaagaccaagttcggcgttggcccggagctgatcatcgatttcctcgcgctgatg
ggcgacaaggtcgacaacattcctggcgtgccaggcgtgggcgagaagacggcatgtggc
ctgctcaacggcatcccaggcggcctcaaggggctttacgacaacctcgaccaggtcgcc
ggcctgccgatccgcggcgccaagtcactgggtgccaagctcgccgaacaccgcgatgcc
gccttcatgtcctacgagctggcgacgatcaagatcgacgtgccgctggatgtcgaggtc
ggcgacctgatgcccggcgagccgcaccgcgaggcgctgattgcgctgtaccgcgagctg
gaattcaagaactggctggacgacctgctgcgcgaggccaaggccgcgggcgagaactgt
gaggtgcagcccgaaggctgctcgatccaggccgaggcacagtacgaaaccctgctggag
caggctgatttcgagcgttggttggatcgcctgaagacagccgaatgcttcgccttcgat
accgaaaccaccagcatcgatgcccagcgtgccgagctggttggcgtgtccttcgccatc
gagccgggccaggcggcctacgtgccgctgcgtcattcctatatgggggtgccgcagcag
ctcgagctggatgccgtgctcgccgcgctcaagccgctgctggaagatccggcgaagacc
aagatctgccagcacggcaagtacgacatgaacgtgctgatgcattacggcatcgagatg
cgcggcatgaccttcgacaccatgctcgaatcctatgtgctcgacgccaccgccacccgc
cacgacatggacagcctggcgctcaagtatctcggccgcggcaccatccgttttgaggac
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggccggc
ccctacgccgccgaggacgccgatgtcaccctgcgcctgcaccagacgttgctcggcaag
ctggagcagacgccatcgctgctcaaggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggcgcgctggtcgatgcgcagctgctcggccagcag
agcgtcgaactgggcgacaagctggtgcagctggaacgcgaggccttcgagattgccggc
gaggagttcaacctcggctcgcccaagcagctctgcgcgatcctctacgacaagctcggt
tgcccggtgatttccaagaccgccggcggccagccgtctaccgcggaaagcgtgctggcc
gaactggccgagcaggattacccgctgcccaaggtgatcatgcagcaccgcagcctgagc
aagcttaagggcacctacaccgacaagctgccgcagcagatcaacccgcgtaccgggcgc
atccacaccagctaccatcaggcggtaaccgccaccggccggctgtcctccagcgacccg
aacctgcagaacatcccgatccgcaccgccgaggggcggcgcattcgccaggctttcgtc
gcagcgccgggctacaagctgctggctgccgactactcgcagatcgagctgcgcatcatg
gcccacctggcacaggatgccggcctgttgcacgccttccagaacgacctcgacgtgcac
cgcgccaccgccgccgaggtgttcggtgtaccgctggagcaggtcagcaacgaccagcgc
cgcagcgcgaaggcgatcaacttcggcctgatctacggcatgagcgccttcggcctggcc
aagcagattgacgttggccgcaaggaagcgcaggagtacatcgaccgctatttcgcccgc
tatcccggcgtgctcgcctatatggagcgcacccgtacccaggccgccgagcagggctat
gttgaaacgctgttcggccgtcggctgtacctgccggagatcaattcgaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggac
atcatcaagcgcgccatgatcgccgtggacggctggctgcaggacagcgggctagatgca
cgggtgatcctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgag
caggtccgcgaagccatctgcccgctgatgagcggtgccgcccagctggacgtgccgctg
ctggtcgaagcaggcgttggcaataactgggacgaggcgcactga
DBGET
integrated database retrieval system
