Stutzerimonas stutzeri RCH2: Psest_4228
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Entry
Psest_4228 CDS
T02391
Name
(GenBank) acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psh
Stutzerimonas stutzeri RCH2
Pathway
psh00061
Fatty acid biosynthesis
psh00071
Fatty acid degradation
psh01100
Metabolic pathways
psh01212
Fatty acid metabolism
psh02024
Quorum sensing
psh04146
Peroxisome
Module
psh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Psest_4228
00071 Fatty acid degradation
Psest_4228
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Psest_4228
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psest_4228
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psh01004
]
Psest_4228
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psh04147
]
Psest_4228
Enzymes [BR:
psh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Psest_4228
Lipid biosynthesis proteins [BR:
psh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Psest_4228
Exosome [BR:
psh04147
]
Exosomal proteins
Exosomal proteins of breast milk
Psest_4228
Exosomal proteins of breast cancer cells
Psest_4228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
BTAD
AMP-binding_C_3
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AGA88698
UniProt:
L0GPM0
LinkDB
All DBs
Position
complement(4408864..4410489)
Genome browser
AA seq
541 aa
AA seq
DB search
MSASVQGYVAAELARGSYQNVHDLLSRACATHPQRTAFSCGDDHLTYAELGSRADAFARY
LRYHAGLQPGDRLALQLPNCLQYPIAVFGALKAGLVIVNTNPQYTAAEARHQFHDSGAKA
ILVLDRLLPQVRAVQADTALRQIILTSVDDLQQPIYESQEDGTLRFMQALRLGEQRSPVQ
REAGLDRLALLQYTGGTTGVSKGAMLTHRNLLANVLQTIELFDQPGLLEPEKDVRIAPLP
LYHIMAFATNCLSSVGMGLHTVFIRDGRNLDETIGAMQRHPFSLLSGINTLFVGLMNHPE
FRSIDFSHLKWATSGGAPLNSEVGRRWQALTGAPIREGFGLTEASPVVATGTQLSPYREG
YIGQALIETELRTVDDEGNDVPPETPGELWLRGPQVMQGYWQRPDETAKVLTPDGWLKTG
DIALLDVDGFVKIVDRKKDMILVSGFNVFPNEIEDVLMQHPSVRECVAVGVPDARKGEAV
KVFVSLKDDTVDERALLEHCRQYLTGYKMPSFLELRDELPKTAVGKLLRRQLRDEARAAA
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttccgtgcaaggctacgtggctgccgaactcgcccgtggcagctaccagaac
gtccatgacctgctctctcgagcctgcgcgacgcatccgcagcgcacggcattttcctgt
ggtgacgaccacctcacgtacgccgagctgggcagtcgtgccgacgccttcgcgcgctac
ctgcggtatcacgcgggtctgcaaccgggtgaccggctggcgctacagctacccaactgc
ttgcagtatccgatcgccgtgttcggggcgctcaaggccgggctggtgatcgtcaacacc
aatccgcagtacaccgccgccgaagcccggcatcagttccacgattccggcgccaaggcg
atcctcgtgctcgatcgcctgttgccacaggtccgtgcggtgcaggcggacaccgcgctg
cggcagatcatcctgaccagcgtcgatgacctgcaacagccaatctacgaaagccaggag
gacggaacgctgcgcttcatgcaggcgctgcgcctgggcgaacagagatcgccggtgcag
cgcgaggcaggtctcgaccggctggcgttgttgcagtacaccggcggtacgactggtgtg
tccaagggggcgatgctcacacaccgcaacctgctggccaacgtgctgcagaccatcgag
ctgttcgaccagcctggtctgctcgagccggaaaaggacgtgcgtatcgccccgttgccg
ctgtatcacatcatggctttcgccacgaactgcctgagttcggtgggcatgggcctgcat
accgtattcatccgcgacgggcgcaatctggacgaaaccatcggtgccatgcagcgtcat
ccgttcagtctgctcagcggcatcaacacgctgttcgtcgggctgatgaatcatccggaa
tttcgcagcatcgatttctcccatctgaagtgggcgacgtccggcggcgcgccgctcaac
agtgaggtcggccgccgctggcaggcgctgaccggcgcgccgattcgcgaaggtttcggc
ctgaccgaggcgtcgccggtggtcgcaaccggcactcagctgagcccctaccgtgaaggc
tacatcggccaggcgctgatcgagaccgagctgcgcaccgtggatgacgagggcaacgac
gtgccgccggaaacgccgggcgaactgtggctgcgtggtccgcaggtcatgcagggctac
tggcaacgtccggacgagacggccaaggtgctcacgcccgatggctggctgaagaccggc
gatatcgcactgctggatgttgatggcttcgtgaagatcgtcgaccgcaagaaggacatg
atcctggtgtccggcttcaatgtgttccccaacgagatcgaggatgtgctgatgcagcat
ccatccgtgcgtgaatgcgtggcggtgggcgtgccggatgcgcgcaagggcgaggcggtg
aaggtcttcgtcagcctcaaggacgatacggttgatgagcgggccttgctcgaacattgc
cggcaatacctcaccggctacaagatgccgagctttctcgagctgcgcgacgagctgccg
aagaccgcggtcggcaagttgctgcgtcggcagctgcgtgacgaggcgcgcgccgctgca
agctga
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