Planococcus shenhongbingii: QWY16_00025
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Entry
QWY16_00025 CDS
T10307
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pshe Planococcus shenhongbingii
Brite
KEGG Orthology (KO) [BR:
pshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshe03032
]
QWY16_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
pshe03400
]
QWY16_00025 (gyrB)
Enzymes [BR:
pshe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QWY16_00025 (gyrB)
DNA replication proteins [BR:
pshe03032
]
Prokaryotic type
DNA Topoisomerases
QWY16_00025 (gyrB)
DNA repair and recombination proteins [BR:
pshe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QWY16_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WKA60542
LinkDB
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Position
4474..6396
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AA seq
640 aa
AA seq
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MEEKDLQPSYDANQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEALAGYC
DEIQVTIEPGDWIRVEDNGRGIPVGMQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGLH
GVGASVVNALSEVTEVYVNRDGKRHYIKFERGAVTEELHVIGEAETTGTTIRFKADADIF
KETTVYEFDLLDHRLRELAYLNRGLKIIVRDEREGEEKEKVYHFEGGIKSYVEHLNKSKD
PFHDEAIFVEAEKDGISVEVAMQYNAGYAANIFSFANNINTHEGGTHESGFKTALTRVVN
DYARKNGMLKEQDANLTGDDVREGLTAIISIKHPNPQFEGQTKTKLGNTEVSTIVNNLFS
GGFERFLLENPSVSRKIIDKGIMASHARMAAKKAREFTRRKSVLEVSSLPGKLADCSSRD
PKISEIYIVEGDSAGGSAKSGRDRHFQAILPLRGKILNVEKARLDRILTNAEIRNIITAL
GTGIGEEFNLAKARYHKVVIMTDADVDGAHIRTLLLTFFFRYMRPLLEAGYIYIAQPPLF
QIKQGKHVDYVYTDAQLKEALGKLSPTPKPNIQRYKGLGEMNATQLWDTTMDPDVRTLLQ
VTLTDAMVADETFHILMGDDVEPRRNFIEENAKYVKNLDV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaagatcttcaaccatcatatgatgcaaatcagattcaagttttagaagga
ttggaagctgttcgcaaaagacccggaatgtatatcggttcaacaagttcaagagggctt
caccacttagtgtgggaaatcgtagacaatagtatcgatgaagcgctggcaggttattgt
gacgaaatccaagtgacaattgaacccggtgactggatccgcgtagaagataacggccgt
ggaattcccgtcggcatgcaggaaaaaatgggccgtccggcagtagaagtcattatgact
gttctgcacgcaggcggtaaattcggcggcggcggctataaagtatccggcggcttgcac
ggtgtaggtgcttcggttgtaaacgcattgtctgaagtgacagaagtttacgttaaccgt
gatgggaaacggcattacatcaagtttgaacgcggagcggtgactgaagagctgcacgtg
atcggcgaagccgaaactacaggaacgacgatccggtttaaagcagatgccgatattttc
aaagaaaccactgtttatgagtttgatcttctggaccaccgcctgcgggaactcgcttat
ttgaaccgcggcttgaaaattattgtaagagatgaacgcgaaggcgaagagaaagagaaa
gtctatcattttgaaggcggcatcaaatcttatgtcgagcatttaaataaatccaaagat
cctttccacgatgaagcgattttcgtggaagctgaaaaagacggcatttctgtagaagtg
gccatgcaatacaatgcaggttacgctgccaatattttttcatttgccaataatatcaat
acccatgaaggcggaacgcacgaatccggctttaaaactgccttgactcgcgttgtgaac
gattatgcccgtaaaaatggcatgctgaaagaacaagacgccaatctgacaggtgatgac
gttagggaagggttaactgctatcatttcgattaaacacccgaatcctcaatttgaaggc
caaactaagacgaaacttggcaatacggaagtcagcacaatcgtcaataacttgttctca
ggcggttttgagcgattccttttggagaatccatctgtttcacgcaaaattatcgataaa
ggcattatggcttcccatgcccgcatggctgctaaaaaagcccgtgaatttacacgccgg
aagtcggtccttgaagtatcaagcttgcctggtaaactggcggattgctcttctcgggat
ccgaaaatcagtgaaatctatatcgttgagggtgattctgcgggaggttcggcgaaatca
ggccgtgatcggcatttccaagcgattttgcctctgcgcggtaaaatcctgaatgttgaa
aaagcacgccttgacagaatccttaccaatgctgaaattcgaaatatcattacagcactt
ggtactggaatcggtgaagagtttaatttggcgaaagcgcgttaccataaagttgtgatc
atgacggatgctgacgttgatggtgcccatatccgtacgcttctgctgacgttcttcttc
cgttacatgcggccattgcttgaagcaggctatatctatattgcccagccgccattgttc
cagatcaagcaaggtaagcacgtggattatgtgtacaccgatgcgcaattgaaagaagcg
cttggaaaattgtctccaacaccaaagccgaatattcagcgctataaagggttaggagaa
atgaacgctacacagctatgggatacgacaatggatccggatgtccggacattgctgcaa
gttacgttaaccgatgcaatggtggcagatgaaactttccatattttaatgggagacgac
gtcgaaccgcgccgtaattttatcgaagaaaatgcgaaatacgttaaaaatctagacgtt
taa
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