Planococcus shenhongbingii: QWY16_00595
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Entry
QWY16_00595 CDS
T10307
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pshe Planococcus shenhongbingii
Pathway
pshe03020
RNA polymerase
Brite
Enzymes [BR:
pshe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QWY16_00595 (rpoC)
Transcription machinery [BR:
pshe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QWY16_00595 (rpoC)
DNA repair and recombination proteins [BR:
pshe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QWY16_00595 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WKA58698
LinkDB
All DBs
Position
120619..124224
Genome browser
AA seq
1201 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRSLEEVIYFASYVVIDPADTPLEKKQLLSEKEYRAYRDKFGKKFQAAMGAEAIKRLLQ
EIDLERETDSLKEELKTAQGQRRTRAIKRLEVVESFRNSGNNPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKG
MAIELFKPFVMKELVERGLAHNIKSAKRKIERLHSEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGKAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGATGEGATFSGPEEAFVAYQTGHVHLHTRIAIL
AGSLKNPTFTEEENKMLLLTSVGKIIFNEILPESFPYINEPTDYNLQVETPAKYFVPTTT
DIRTHIAEAELVTPFKKKILGEIIAEVFKRFHITETSRMLDRMKTLGFKYSTQAGITVGV
ADIVVLPDKNEILVEAQANVDKVMKQFRRGLITEEERYARVISHWSNAKDIIQEKLMASL
DKLNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDAIVRENDCGTDRGLLVGALMEGTEVIEELD
ERIVGRHAKKTIRHPETKEVIVAKDELITQDLTRLIMEAGIKEVTIRSAFTCNTKHGVCK
KCYGTNLATGDEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
ESRNPKGQAVISEINGTVTEVDEIREGQKEITIQGDVETRKYLAPYNARLKVQVDDVIRR
GEVLTDGSIDPKQLLQVKDVQSVQLYLLKEVQKVYRMQGVEIGDKHVEVMVRQMFRKVRV
IEAGDTDLLPGSLLDIHQFSEANKKAVLEGNLPATSRPVILGITKASLETESFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLIPAGTGMQRYRQIKIARSEKEAQQEIVGTE
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgttaacaattttgagtatatgaaaatcggattagcgtcacccgataaaatc
cgctcatggtcttatggagaagtcaaaaagccagaaacaattaactaccgtacattaaaa
ccagaaaaagacggtttgttctgtgaacgtattttcggtcctacaaaagactgggaatgc
cattgcggtaaatacaaacgtgtccgttataaaggtgtagtctgcgatcgttgtggcgtt
gaagtcactcgttcaaaagtacgccgtgaacgcatgggccatattgaacttgcagctcct
gtatcacatatttggtatttcaaaggaattccgagccgcatgggccttatattagatatg
tccccgcgctcgttggaagaagttatttattttgcttcttatgtagtaatcgatcctgct
gacacaccgcttgaaaagaaacagcttctttctgagaaagaataccgcgcttatcgcgat
aagttcggtaaaaaattccaagcagcaatgggtgctgaagcaatcaagcgacttctacag
gaaattgaccttgaacgcgaaacagattcgttaaaagaagagttgaaaactgctcaaggc
caacgccgtactcgtgcaatcaaacgccttgaagtagtggaatcattccgcaactctgga
aataatccggattggatgattctggacgttttgccggtaattccaccggaacttcgccca
atggttcaattagatggcggacgttttgcaacttctgacttgaatgatttgtatcgccgg
gtaatcaaccggaacaaccgccttaaacgattattggatcttggtgcaccaagcatcatt
gttcaaaacgaaaaacgtatgcttcaagaagctgtagatgcattgatcgacaatggtcgc
cgcggccgtcctgttactggaccgggtaaccgtccgttaaaatctctttctcatatgttg
aaagggaaacaagggcgtttccgtcaaaaccttcttggtaaacgtgttgactattctggc
cgttccgttatcgttgttggaccgaacttgaagatgtatcagtgcggattaccgaaagga
atggcaattgagctattcaagccttttgtaatgaaagaacttgttgagcgaggtcttgcg
cataatattaagagcgcgaaacgtaaaattgagcgtttgcattcagaggtttgggatgta
cttgaagacgtaattaaggagcatccggttctattgaaccgtgccccgactcttcacaga
cttggtattcaagcatttgaaccaacacttgtcgaaggtaaagcaatccgtctacatccg
ttagtatgtactgcatacaacgccgatttcgacggtgaccaaatggctgttcacgtaccg
ctttcttctgaagcacaagctgaagctcgacttcttatgcttgctgctcagaatatcttg
aacccgaaagacgggaaacccgttgtaactccatctcaggatatggttctaggaaactat
tacctgactcttgagcgtaaaggtgctacaggtgaaggtgcaacattctctgggcctgaa
gaagcgtttgtcgcttatcagacaggacatgttcacttgcacacaagaattgcaattctt
gctggttctttaaagaatccgacgtttacagaagaagaaaacaaaatgcttttattgaca
tctgtcggtaaaattattttcaatgaaattctgccggaatctttcccgtatattaacgaa
ccaaccgattataatttgcaggtggaaacgccagctaaatatttcgtgccaactacaaca
gatatccgtactcatattgcggaagctgagctggtaacgccattcaagaaaaaaattctt
ggagaaatcatcgctgaagtattcaaacgtttccatattactgaaacctcaagaatgctt
gaccgtatgaagacccttggattcaaatactcaacacaagctggtattacagttggagtt
gcagatattgtcgtacttcctgataaaaatgaaatccttgttgaagcgcaagcaaacgta
gataaagttatgaaacagttccgacgtggattgattactgaggaagaacgttatgcacgc
gtcatctcacattggagcaacgcaaaagatatcattcaggaaaaactgatggcttctctt
gataaattgaacccaatttacatgatgagtgattccggagcccgaggtaacgcatccaac
tttactcagcttgctggtatgcgcggacttatggccaacccggctggacgcattatcgaa
cttccgattaaatcttcattccgtgagggtctgacggtactcgaatacttcatctctact
cacggtgcacgtaaaggtctggccgatactgcattgaaaactgccgattcaggttacttg
acgcgccgtttggttgacgtggcacaagatgctatcgtccgagaaaacgattgtggaaca
gatcgagggctgcttgttggggcattgatggaaggtacggaagtaatcgaggagctggac
gagcgtattgtaggccgccatgcgaagaaaacaatccgccatcctgaaacaaaagaagta
attgtagcaaaagacgaattgattactcaggacttgactcgcttgattatggaggcagga
atcaaggaagtaacaatccgttcagcgtttacatgtaatacgaaacacggcgtatgtaag
aaatgttacggcactaacttagcgactggtgacgaagttgaagtgggcgaagcagttgga
atcattgctgctcaatcaatcggtgaaccgggaactcagcttacaatgcgtactttccat
acaggtggggttgcgggagacgatattacacaaggtcttccacgtatccaggaaattttt
gaatcgcggaatccaaaaggtcaagcagtaatttctgaaattaacggtaccgttaccgaa
gtagatgaaattcgcgaaggccaaaaagagatcacaattcaaggggatgtcgaaacacgt
aagtacttggcgccatataatgcccgcctgaaagtccaagtggatgatgttatccgccga
ggtgaagtattaactgatggttcgattgatccgaaacaattgcttcaagtaaaagatgtt
caatctgttcaactgtatttactgaaagaagttcaaaaagtataccgtatgcagggggtt
gaaatcggcgataagcacgtagaagttatggttcgtcaaatgttccgtaaagtccgtgtt
attgaagccggcgataccgacttgttgccaggttcgcttttggatattcaccagttctca
gaagcgaataaaaaggcagttttagaaggcaatttgccagcaacgagccgcccagttatt
cttggtattaccaaagcttctcttgaaacagaatcattcctatcagccgcatcattccaa
gaaacgacacgcgtcctcacagatgcagcgattaaagggaaacgtgatgagttgttaggt
cttaaagagaacgtcatcatcggcaaacttattccagctggaacaggaatgcagcgttat
cgccaaattaaaattgcgcgaagtgaaaaagaagcacaacaagaaatcgtcggcacagag
tcataa
DBGET
integrated database retrieval system
