Planococcus shenhongbingii: QWY16_02030
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Entry
QWY16_02030 CDS
T10307
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
pshe Planococcus shenhongbingii
Brite
KEGG Orthology (KO) [BR:
pshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pshe03012
]
QWY16_02030 (abc-f)
Translation factors [BR:
pshe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
QWY16_02030 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_23
RsgA_GTPase
AAA_22
MMR_HSR1
ATP-synt_ab
AAA_29
Dynamin_N
NACHT
NB-ARC
nSTAND_NTPase5
MobB
AAA_28
cobW
AAA_24
AAA_16
AAA_14
DO-GTPase2
AAA_7
Septin
AAA_13
MeaB
TMEMspv1-c74-12
AAA_15
TrwB_AAD_bind
DUF16
Motif
Other DBs
NCBI-ProteinID:
WKA58960
LinkDB
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Position
377592..379226
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AA seq
544 aa
AA seq
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MIISQFQQIMCHFANQKLFNHIKGEIAEGQRIGLVGRNGEGKTTLLNVLAGKLHPTEGAV
TWKKGCAIGLLQQSPNENGEQKVHQLLRNVFSELLTVQLQLEDMEKQMGMAAPEEMERIL
RRYGAMQDDFIQRGGYEIEVRIDQILNGLKIKSLKEEQWGHLSGGERTKVGLAKLLLQEP
ELLLLDEPTNHLDLEAIEWLGSFISHYKGTIVLVSHDRYFLDETVTQIWELDQGDLIQYK
GNYSAYVKEREARLLIEFQQYQDQQKKIRKMKETIKRLKEWANRANPPNAGMHRQAKSIE
KALARIELLDRPVLSRKQMALDFQMADRSGKDVVRMESIWKGFGERILFHELNLHVRFGE
RVAIVGSNGTGKTTLLNMILDTEKPDAGDIILGNSLSIGYLSQHTLEMDNNRSVLEEFRD
VVPVSEYDARPILAQFLFFGNMVFQPVRQLSGGERMRLRLAQLMHMNHNLLILDEPTNHL
DLEAKEVMEEALSNFPGTIISVSHDRYFLDKLFPVTYWLHNQSIERFDGNYSFAKEKKQP
VSTG
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcagccaattccaacaaattatgtgccattttgcgaatcagaaattatttaat
catattaaaggggaaattgccgaaggccagcggattggacttgtcggcaggaacggcgaa
ggaaagacgacgctgctgaatgtcttggctggaaaactgcatccgacagaaggcgcagtt
acctggaaaaaaggctgcgcaatcggacttttacagcagtctccgaatgaaaacggagaa
caaaaagtccatcaattgctgaggaacgtgttttcagaattgcttaccgtacaacttcag
ctcgaggatatggagaaacaaatgggcatggcagctccggaagaaatggaacggatcttg
cggcgttatggtgccatgcaggacgattttattcagcggggcggttacgaaattgaagtc
cgaatcgatcagattcttaatggcttgaaaatcaaatcattaaaagaagaacaatgggga
catttgagcggcggcgaacggacaaaagtaggtttggccaaattgcttttacaggaaccg
gagttactgctgctggatgaaccaacaaaccatttagacttagaggcgattgaatggctt
ggttcttttattagccattataaaggcaccattgtgctggtttcacatgaccggtacttc
ctggatgaaacagtcactcaaatttgggagttggaccaaggagatttgattcaatataaa
ggaaattattcagcgtatgtaaaagagcgcgaagcccgtctgctgattgaatttcagcaa
taccaagaccagcaaaagaaaatccggaaaatgaaagaaacaatcaagcgcttgaaagaa
tgggcaaatcgggcgaatccgccaaatgccggaatgcaccgccaagcaaaaagtatagaa
aaagcgttagctcgtattgagttgctcgatcgtcctgtcctatccagaaaacagatggct
ctcgattttcagatggcagaccgaagcggaaaagatgtggtccggatggaaagtatctgg
aaaggctttggagaacggatattattccacgaactaaacctgcatgtccgattcggggag
cgggtagcgattgtcggctccaatggcacgggaaagacaacgcttttgaacatgatattg
gatacagaaaagccggatgccggggacatcattcttgggaacagtttatccatcggttat
ttatctcagcatacattggaaatggataataaccgaagcgtgttagaagagttccgggat
gttgtgccagtgtcagaatacgatgcccgccctatattggcgcagttcttgttttttggc
aatatggtgttccagcctgtgcgccagctaagcggaggagaacgcatgcggctccggctt
gctcaattgatgcacatgaaccataatctattgattttagacgaaccgacaaaccattta
gatctggaagcgaaagaagttatggaagaagcactgtccaattttcccggaacaatcatc
tcggtttcccacgaccgctatttcctggataagctgtttcctgtaacttattggctccat
aatcagtcaattgaacgttttgatgggaattattcttttgcgaaagaaaaaaaacagccc
gtcagcacgggataa
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