Planococcus shenhongbingii: QWY16_02685
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Entry
QWY16_02685 CDS
T10307
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pshe Planococcus shenhongbingii
Pathway
pshe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pshe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWY16_02685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshe03019
]
QWY16_02685
03009 Ribosome biogenesis [BR:
pshe03009
]
QWY16_02685
Enzymes [BR:
pshe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QWY16_02685
Messenger RNA biogenesis [BR:
pshe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWY16_02685
Ribosome biogenesis [BR:
pshe03009
]
Prokaryotic type
rRNA helicases
QWY16_02685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
CMS1
DeaD_dimer
NAT10_TcmA_helicase
NDK
Motif
Other DBs
NCBI-ProteinID:
WKA59085
LinkDB
All DBs
Position
514186..515703
Genome browser
AA seq
505 aa
AA seq
DB search
MVKFSELNISETTLKSVKRMGFEEATPIQEGTIRLGMEGKDIIGQAQTGTGKTTAFGIPL
IEKIDTKDGNVQGLVIAPTRELAIQVSEELYRLGQDKNVRILSVYGGQEISRQIRALKNR
PQIIVGTPGRLLDHINRRTLKLDNVNTLILDEADEMLNMGFIEDIQTIMSSVPDTRQTLL
FSATMPDAIRRIAEKFMKTPEIVKIKSKEMTVENIEQFYVKSVEREKFDILSRLLNVQQP
ELAIIFGRTKRRVDELAHALNIRGYVAEGIHGDLSQAKRMSVLKQFKAGKIDILVATDVA
ARGLDISGVSHVYNFDIPQDPESYVHRIGRTGRAGKKGVAVTFVTPREMSYLAIVERTTK
KKMEALIPPTADEAVLGQKRVAMEQLQEMTEKNNLGDYRVFAKEMLEKFDAVDLIAAALK
TMTKEPEDVPVSISEERPLPSRGGGGYKGKGGRSSGGGGYKGSRSTGSGRPSSSRSGSGA
GAGRRREGAASSTGGRPGRTRRHES
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaattttcagagttaaatattagcgaaacaactttaaagtccgtaaaacgtatg
gggtttgaagaagcaacaccgattcaagaaggtacgatccgtctaggtatggaaggcaag
gacattatcggacaagcccaaacgggaactggtaaaacaactgcattcggtattccgttg
attgaaaaaatcgacactaaagatggcaacgtccaaggattggttattgcgccaactcgc
gaattagcaatacaggtttcagaagagttgtacagactgggccaagataaaaacgtgcgc
attctttcagtatacggtggccaagaaatcagccgccaaatccgtgcacttaaaaaccgc
ccacaaatcatcgttggtacaccaggacgccttttggaccatatcaaccgccgtacgctt
aaattggataatgtaaacacattgatcctggacgaagcagacgaaatgttgaacatgggc
ttcatcgaagacatccaaacaatcatgtcaagtgttcctgacactcgccagacattgttg
ttctcagcgactatgccggatgctatccgccgcatcgcagagaaattcatgaagactcca
gaaatcgttaaaatcaaatcaaaagaaatgactgttgagaatattgagcagttctacgtt
aaatcggtagagcgcgaaaaattcgatatcctttcacgccttttgaacgtacaacaacca
gaacttgcaatcatcttcggccgtacaaaacgccgggttgacgaattggcacatgctttg
aatatccgcggctacgtagctgaaggaattcacggcgacttgagccaagcgaaacgtatg
tctgtgttgaagcaattcaaagcaggtaaaatcgacattttggttgccactgatgtagca
gctcgcggacttgatatctcaggcgtatcacacgtatacaactttgatattccacaagat
cctgaaagctatgtccaccgtatcggccgtactggccgtgcaggtaaaaaaggagttgca
gtcacgtttgtaacaccacgtgaaatgagctacttggccatcgttgaaagaacaactaag
aaaaaaatggaagctttgattcctccaactgctgatgaggctgtacttggccaaaaacgc
gttgcaatggaacaattgcaagaaatgactgagaaaaacaacttgggcgactaccgcgta
tttgcgaaagaaatgcttgagaagtttgacgctgtcgatttgattgcagcagctcttaaa
acaatgacaaaagagccggaagatgtaccggtttctatttcagaagaacgcccgttgcca
tctcgcggcggcggcggttataaaggcaaaggcggacgcagcagtggaggcggcggttat
aaaggcagccgttctacaggttcaggccgtccatcttcaagtcgttcaggttcaggggct
ggcgctggccgtcgacgtgaaggcgcagcaagcagcactggcggacgtccaggacgcact
cgccgccacgaatcttaa
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