Planococcus shenhongbingii: QWY16_12080
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Entry
QWY16_12080 CDS
T10307
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pshe Planococcus shenhongbingii
Brite
KEGG Orthology (KO) [BR:
pshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshe03032
]
QWY16_12080
03036 Chromosome and associated proteins [BR:
pshe03036
]
QWY16_12080
03400 DNA repair and recombination proteins [BR:
pshe03400
]
QWY16_12080
DNA replication proteins [BR:
pshe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QWY16_12080
Chromosome and associated proteins [BR:
pshe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QWY16_12080
DNA repair and recombination proteins [BR:
pshe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QWY16_12080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Rpf1_C
DUF6470
Motif
Other DBs
NCBI-ProteinID:
WKA57237
LinkDB
All DBs
Position
complement(2441232..2441504)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVNSVAEAAELSRKDAAKAVDAAFEAIQNALTQGDKVQLIGFGNFEVRERAARKG
RNPQTGAEIEIAASKVPAFKPGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagaattagtgaactctgttgctgaagcagctgaactttctcgtaaagac
gctgcaaaagcagttgacgctgcatttgaggcgattcaaaacgctctaactcaaggtgac
aaagtacaattaatcggatttggtaactttgaagtacgcgaacgcgcagcacgcaaaggt
cgtaacccgcagactggtgctgaaatcgagatcgctgcaagcaaagttcctgcatttaag
ccaggtaaagcgcttaaagacgcagtgaaataa
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integrated database retrieval system
