Planococcus shenhongbingii: QWY16_13920
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Entry
QWY16_13920 CDS
T10307
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pshe Planococcus shenhongbingii
Brite
KEGG Orthology (KO) [BR:
pshe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshe03400
]
QWY16_13920 (addB)
Enzymes [BR:
pshe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWY16_13920 (addB)
DNA repair and recombination proteins [BR:
pshe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QWY16_13920 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WKA57589
LinkDB
All DBs
Position
complement(2819024..2822500)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSLRIVYGRAGSGKTRFIQEEIAEELKRSRVGNPIFLVVPDQMSFSTEYRLSSAYGMSGM
IRAQAATFKRLAWRVLQEVGGISRKEVDTFGYRMLIRSLLEEHREEFQLFRRAAGKRGFT
DQIEQLVKEFARYCVDCGELTTIRASLASAGAPRTLLDKAADLELILMELESRLGKVFVD
SEGHLALLSEKIKFSETIKSADIYIDGFFTFTAREYEIIFELMKYAKNVTIALPLDSGTD
AHDEQAIFYQTANTAQRLTEQARKEGVEVDLPVHMDMQQRFNKAELAHLEEHFDDYPLAT
SVSSGAISLVEASNRRAEVHAMARSIRQQTREGMRYKDIAILYRQPEVYDELINTIFPQY
DIPYFISRKKSMLHHPLIEFSRSVLEAVLSNYSYEPVFRAVKTDLFFPEGSVSKWRERSD
LLENFIIANGIYGERWFDEKRWFFKKYRGLEFHTGIQTDEELAAQMELHAVRDLIRGPLS
ELKDKLDKCSTGREIAETLYLFIEQMNVYGKLQSLKEREESEHRLLAATEHEQAWKQWIE
VLDQFVLMFGDKEVELSTAVKILDEGFETLEFSRIPPSLDQITVSKIDLARLMDIKSVFV
IGVNDGVLPKRVEQEGLLTDTEREWFATIGIELAPTSKMRLMDETYTAYRTFTASSDFLT
VSYPIADEEGKALMPSLYIQKIKDMFNLELTPAVIDPEELENASPLPYISHPRASLAYLT
SQLRAGELAPEWRAVLSYYREDPFWASVVERIVEPIKPNVADQLREEIAEPLYGLPVSSS
VSRVETYFSCPFAQYVSYGLRLEERDQYKLAAPAMGDLFHAAIKWISDEVSRLGVSWSSL
SQKQCQELAKGAIEQLSPYFVNHILISSHRYRYIQHKLEGIIRQTAFMLSRHAKVTGFAP
VALDVGFGGAEAIPPLDIALKRGRKMNVRGRIDRIDSTEINGKPYIRIVDYKSSKQGLDL
GDVYHGLSLQTFTYLDVALTHSERWLGTQAEPAGVLYFHMHNPMLKLSKLMTADEIEEEV
AKSFKMNGLIVEDPDVIYAMDSEIEGFSNVIPVRMNKKGEISKSQSKTVQREDMEMIRHF
VRNKHQKAGNGILDGDTQITPYKVKEDTPCQFCSYRSICQFDPSDPDQSYRKLPDLSSEK
AIELIRKETASDDSDKTD
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgttgcgaattgtatatggacgagccggatcagggaaaacccggtttatccaagaa
gagattgcagaagagttaaaacgcagcagagttggaaatccgatatttttggttgtaccg
gaccagatgtcgttttcaacagaatatcggctttcttctgcctatggcatgagcgggatg
atccgtgctcaggcagccacttttaagaggctggcgtggcgtgtcctgcaggaagttggc
ggaatcagccggaaagaagtagacacttttgggtatcgcatgctgatccgcagtttattg
gaagagcatagagaagaatttcaattgtttcggagagcggccggtaaaagagggttcacc
gatcagattgaacagctagtaaaagaatttgccaggtattgtgtcgattgcggagaattg
acaacaatccgggcctctttggcttctgctggagccccgcgcactttattggataaagcg
gcggatctggagctcatcttgatggaacttgaaagccggcttggaaaagtctttgtggac
tctgaaggccatttggctttgctgtccgaaaaaatcaagttttcagagacgatcaagtct
gcagatatttacattgacggcttttttacgtttactgcacgtgaatacgaaatcatcttc
gagttgatgaagtatgctaaaaacgtcacaatagcccttcctttggacagtggcacagat
gcgcatgatgagcaggcaattttctatcagaccgcaaatacagcccagcgcttaacagag
caggccagaaaagaaggcgtcgaagtcgacctgccggtgcatatggacatgcagcagcgt
ttcaacaaggccgaactcgcgcatcttgaagaacactttgatgattatccgttggcaact
tcagtatcaagcggcgccatctctttagtcgaagcttccaaccgtagagcggaagtgcat
gcgatggcgcggtccatccggcagcagacacgtgaaggcatgcgttataaagatattgct
attttatatcgacagcctgaagtgtacgatgaactcatcaatacaatctttccgcaatac
gatattccgtatttcatcagccgcaaaaaatcgatgctgcaccatccgcttattgaattc
agccggtcggtgctggaagccgtattgtccaattattcctatgagccggtcttccgtgct
gttaaaacagatttatttttcccggaaggcagtgtatcgaaatggcgggaacgcagtgac
cttctcgaaaatttcatcattgccaatggaatctacggcgaacgctggtttgacgaaaaa
cgctggttttttaaaaaataccggggcttggagttccatactggcatccagacggatgaa
gaattggctgcacagatggaacttcatgctgtacgcgatttgatccgaggaccgctgtca
gaattgaaggacaaactggataagtgttcaacgggcagagaaattgcggaaaccctttat
ttgttcattgaacaaatgaatgtctacgggaaactgcaatccttaaaagagcgggaagaa
tcagagcatcgcttgctggctgctacagagcatgaacaagcttggaaacagtggattgaa
gtgctggaccaatttgtgcttatgttcggggataaggaagtggaactcagcacggcagtt
aaaattttagatgaagggtttgaaacattggagttttcacgcattccgccttctcttgat
caaataaccgtgtctaaaatcgatttagcgcggcttatggatatcaagtcggtatttgtc
attggagtgaatgatggcgttctgcctaagcgcgtggagcaggaagggctgctgaccgat
acggaacgggaatggtttgcaacgattggcatcgaactggctccgacttcaaaaatgcgt
ctgatggatgaaacttatacagcgtaccgtacattcactgcatcctcggattttttgact
gtttcttacccgattgcagacgaagaaggaaaagcgttgatgccgtcgttatacatccag
aagattaaagatatgttcaatctggaactgacaccagcagtgattgatcctgaagaattg
gaaaacgcttctccgctgccttatatatcacatcctcgtgccagcctggcttatttaacg
tctcagctgcgtgcaggagagcttgcgccggaatggcgggcagtactgtcatattatcgc
gaagatccattttgggcgtctgtggtcgaacggatagtcgaaccgatcaaaccgaatgtg
gccgatcaattgcgtgaagagattgcagagccgctatatggtttgccggtctcttcaagt
gtttcccgggtagaaacttatttcagctgtccatttgcgcaatatgtttcttatgggctg
cggcttgaagaaagagatcaatataaattggcagctccggcaatgggggatttgttccat
gcagctattaaatggatttcagacgaagtgagccggctcggtgtttcttggtcttcttta
agccaaaagcaatgccaggaattggctaaaggcgccattgaacagctgtcgccttatttt
gttaatcacatcctcatcagttcacaccgctaccgatatatccagcataaattggaaggc
atcattcgccaaaccgcctttatgctcagcaggcacgccaaagtgaccggctttgcacct
gtggcgttggatgttggatttggaggagcagaagcgattccgccgcttgatattgcatta
aagcgcggacgcaaaatgaatgtgcgcgggcgcatcgaccgaatcgattcaacagaaatc
aacggcaagccgtatatccggattgtcgattataagtcttcaaaacaaggcctggacctc
ggcgatgtctatcatggtctgtctttgcagaccttcacctatttggacgttgcattaact
cattcggagcgttggctcggcactcaggcagaaccggctggcgtcctgtatttccatatg
cataatcctatgctgaagctgtccaaactgatgactgcggacgaaattgaagaagaagtt
gctaaatcatttaaaatgaacgggttgattgtagaagacccggatgtgatttatgcgatg
gacagtgaaattgaaggcttttcaaatgtaattccagtccgaatgaacaaaaaaggcgag
atttctaaatcccagtccaaaacggtacaaagagaagacatggaaatgattcgccatttt
gtccgcaataaacaccaaaaagcgggcaatggcattttagatggcgatacccaaatcact
ccttataaagtgaaagaagacacaccatgccaattctgttcttaccgctccatctgccaa
ttcgatccgtcagatcccgatcaaagttaccgcaaactgccggatttgagcagtgaaaaa
gcaatagaacttattcgaaaggagactgcaagcgatgattccgataaaaccgactga
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