Planococcus shenhongbingii: QWY16_14080
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Entry
QWY16_14080 CDS
T10307
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pshe Planococcus shenhongbingii
Pathway
pshe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QWY16_14080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshe03000
]
QWY16_14080
Transcription factors [BR:
pshe03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWY16_14080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
HTH_3
TPR_10
TPR_NPHP3
TPR_MalT
TPR_8
TPR_INTS8_3
Motif
Other DBs
NCBI-ProteinID:
WKA57620
LinkDB
All DBs
Position
2852897..2854186
Genome browser
AA seq
429 aa
AA seq
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MNTGLRLKYHRLKKRISLEETASGILSPRELKKIESGLKEPSLLDLEALCKKLEISLAPK
ENPIGQVLVKNFKTSLLHPQNKGKIMEQYADIHDHPLLHANEDIELEYNIQQIRYFIITG
DLESAEEKLKEMERFKEFMNQEQFYLFHKYTGNYHYLLDDPESALKTYLMAEKIVPTTIA
SSDLADLYYSIGITANRCWEISMANKYTELALKIYQQEFIPKRIVECHLNIAITHQRFGN
YKTAMEHHRNALAIGSKLDVDILRFTTEFNLGYSYFIFQDYELSLIHIENCLEFIPPEYI
ADMLLSYCILIKCHIELGNLEEANKWKVKGVKLIEVKKLNMDSPTNHAFKEAYIEFICLT
HFLNDEYDDFESMVNTRLIPCLEIDNNFFEMGYYYGHLGNVYYKLKKYEKSAFNFNKARE
AYKKTTIIR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaggtttacgcctcaaatatcatagattaaaaaagagaatcagcttagaagaa
accgcttcagggattctttctccaagagaactgaaaaaaattgaatctggccttaaagag
ccctcattgcttgatttagaagcattatgcaagaagctggaaatttctttagctccaaaa
gaaaacccgattggccaagtactggtcaaaaacttcaaaacttctctgcttcatcctcag
aataaaggaaaaattatggagcagtatgcagatatccatgatcatcccctgttgcatgcc
aatgaagatatcgaattggaatataatatccaacaaatccggtatttcattattactgga
gatttggaaagtgcagaagaaaagctaaaggaaatggaacggtttaaagaatttatgaac
caggagcagttttacttgttccataaatatacaggcaactaccattatcttttagatgat
cctgaatcagcgctgaaaacttatttgatggctgaaaagatagttccaacgactatagcc
agttcagatttagccgatctctattactcaattggaattacagcaaatcgctgctgggaa
attagtatggctaataaatatactgagttagccttaaaaatctatcaacaagagtttatc
cccaaaagaattgtagaatgccatttgaatattgctatcactcatcaacgttttggcaac
tacaaaacagcaatggaacaccatcgaaatgcgttggcaatcggaagcaaactggatgtt
gatatactaagatttacaacagaatttaacctaggttattcctactttatttttcaggat
tacgaattgtcgcttatccatattgaaaactgtttagaattcattcctcctgaatatatt
gctgatatgctgctaagttactgcatcttgattaaatgccatatcgaacttggcaatttg
gaagaagctaataagtggaaagtgaaaggcgtcaaacttattgaagtaaaaaaactcaat
atggattcgccaacgaaccatgcctttaaagaagcttatatcgaatttatttgtttaact
cattttttaaatgatgagtatgacgattttgaaagcatggtaaatacacgattgattcca
tgtctggaaattgataacaatttttttgaaatgggatattattacggacatttgggtaat
gtttactataaactaaagaagtatgaaaagtctgcttttaatttcaataaagcaagggaa
gcatacaaaaaaactacaattataagatag
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