Pseudomonas shahriarae: HU773_000255
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Entry
HU773_000255 CDS
T07642
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02025
Biofilm formation - Pseudomonas aeruginosa
pshh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU773_000255 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_000255 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshh02044
]
HU773_000255 (tssM)
Secretion system [BR:
pshh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU773_000255 (tssM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QXH89350
LinkDB
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Position
complement(51794..55294)
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AA seq
1166 aa
AA seq
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MKAFFSFMIRWVIPVLGLIALGLIIWFVGPLLDVLVPEGRRWALIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAAETPADPNSVATAEELATLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSTVDKAAWLGFLDLLKKQRARRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEDRAQVWGMTFALDDGKHSDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFSAV
AFAERGLVGVNPKVERRRKWVARGVLAATVALVLVVSSLWWLSYRANQAYIAQVDHKVAP
LGQAVQSLSPAQRDVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGSSDFLYEGLKAYLMLADSEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALSAHLQALFDRHPPNARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPDGV
TDFRINEAAGRDAALVFSRKSGKPLGEPLSGLFTAKGYRQGFLLTSLNQAGTLAEEQWVL
GQAPADQQNVASLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGEAQPTASAPALTEDPV
TAHFAELNSIVAKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRAGGTQPIVRFELKPVAMDATITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSSGGVRISIMPPSASGRSGVTLDGPWAWFRLLEQSELSAGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagtttcatgattcgctgggtgatccccgtgctgggcctgattgcc
ctgggcctgatcatctggtttgtcgggccgttgctcgacgtgctggtgccggaaggccgg
cgctgggccttgatcatcctggtcttcgcggtgtggattgcctaccgcgtgtttcgcatc
atccaggcgcgccgtcaggccgccgaagtgatgcgcagcctggccgccgaaaccccggcc
gaccccaacagtgtcgccactgccgaagagttggccaccctgcgccaacgcatggacgaa
gccctcgcgctgttgaaaaaggccaagttgggcggtgacgaacggcgcaacctctatgag
ttgccgtggtacgtgatcatcggcccgccgggctcgggcaagaccaccgcgctggtcaac
tccgggttgcacttccccctggctgctcagttgggtgccggtgcggtgcgcggcgtgggc
ggtacacgtaactgtgattggtggtttaccgatcaagcggtgctgctggacaccgccggg
cgctacaccacccaggacagcaactccacggtggataaagccgcctggctgggcttcctc
gacctgctgaaaaagcagcgcgcccgccgcccgatcgatggcgcttttatcgccatcagc
ctgtcggacctgctgctgggcactgacgccgagcgcgccgcccacgctgccgcaatccgc
ctgcgcatccaggagttgtacacccagttgggcgtgcgtttcccgatttacctgatgctc
accaagctcgatctggtgccggggttcatggagtttttcgacaacctgagcaaggaagat
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaagcacagcgacagcccc
ctggcccatctgcaaagcgaattcgccggcctggagcagcgcctcaacgagcgcctggtg
gaacgcctgcaacaggagcgcgacccggcgcggcgcgacctgatctatggcttcccgcag
caattcggtgcgctgaaggattgcctgcaaagcttcctcgagggcgtgttcaagcccaat
gcctttgaagagcgcgtgctgctgcgcggcgtctatttcaccagcggcacccaggaaggc
agcccgattgaccgactgatcggcgccatggcccagagcatgaacctcgaccgtcagcac
ctggcgcgccagagcggtactgggcgcagctacttcatcgagaaactgttcagcgccgtg
gcctttgccgagcgtggcctggtgggggtcaacccgaaggtcgagcgccgccgcaaatgg
gtcgcccgtggcgtgctcgccgcgacggttgcgctggtgctggtggtcagcagcctgtgg
tggctgagttatcgcgccaaccaggcgtatatcgcccaggttgaccacaaggtcgcgcca
ctgggccaggccgtgcagagcctgagcccggcacagcgtgatgtgctggcggtgttgccg
ctgctcaacgcggttaagaacctggcgggcgattcgccaagctggtccgagggcctgggc
ctgtatcagggcgacatgctcgaagccgaatctgccagtgtctaccgcaagctgctgatc
gcggtgttcgccccgcgcctggtgacgcgcatcgaagagcaactgcacggtggtggcagt
tccgatttcctctacgaaggcttgaaggcctacctgatgctggcggacagcgagcattac
gacccggactttatcaaggcctggatcgccctggactgggaccgcaacctgccgcgcgac
ctgcccgccgatcagcgccaggccctcagcgctcacctgcaggcgctgttcgaccgccat
ccgccgaatgcgcgcctcgacccacggctgatcgacgacttgcgccggcaactgcaacaa
ctgccggtggcccagcgtgtgtacgaccgcgtcaagcgccagaaactgcccgacggcgtg
accgacttccgcatcaacgaagccgctgggcgggatgctgcgctggtgttcagccgcaaa
agtggcaagccgctgggcgagccgttgagtggcttgtttaccgccaagggctatcgccag
ggctttttgctgaccagcctgaatcaggccgggaccctggccgaagagcaatgggtgttg
ggccaggcgccggcagatcaacagaatgtggcgagccttgccgccgacgtgcgacgcctg
tacttccaggattatcagcgccaatgggacgccttgctggcggatatcgactttgtgccc
atcaccagcgtggcccaggcggcggacgtgttgcgggtgatctccggcccgacctcgccg
ctgaaaaagctgctggtggcggtggccaaggaaaccgacctgcaagctgaagagcgccaa
ttggcggccaagggcgtgccggtggaaggtggcgtcgacaagctcaaggagcgcctcggc
agcctgctcggcgaggcccaaccgacggccagtgcaccggccctcacggaagacccggtg
accgcgcactttgccgaactcaacagcatcgtcgccaagaacgaaggcgagccggcggcc
atcgacggcctgctggcggatatgaatgcgctgtatgtgcaggtcagcgccatggtcggc
gccagtggcgatgccttgctcggcgaagccaagaaccaggccgcagcggccgccacccgg
gtcagcctgaatgccgaacgccagccgccgctggtacagggcatggtcaagtcggtggtc
aactccaccaccaacagcatgatgggcggggtgcgcaatcaactgaacgcggcctgggtc
agtgaagtggtgaatgtgtatcgccagtccctggccgggcgctacccgatgtcccccggc
agtgctcgggacgccaccctggacgacttcggccagttcttcggggtgggcggggtgatg
gacaactacttccgcaaatacctgcaaccctacgtcgatacctccgcgcagacctggcgc
tggcagccgggggcggcgcagaagctcggcatcgcgccgggcgtgctgcaaaccttccag
cgcgcggcgactattcgggatgcgttctttcgcgcggggggcacgcagcccatcgtgcgt
ttcgagctcaagccggtggcgatggacgcgaccatcacccagttcctgcttgacctggac
ggccagcaactgagctacgaccacggcccgagccggccggtggcgatgcaatggccgaat
cccggcagcagtggaggggtgcgtatctcgatcatgccgccatcggccagcggtcgctcc
ggcgtcaccctggatggcccatgggcgtggttccgcctgttagagcaatcggagctttct
gccggcaattcgccggaccgcttcaacctgcgtctgcgggtcgacggcgcgagcatcgcc
tatgaattgcgtgccaacagcgctttcaacccgttcaagagccgtgtgctcagtggcttc
agcctgccggagcggttatga
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