Pseudomonas shahriarae: HU773_000265
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Entry
HU773_000265 CDS
T07642
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_000265 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshh02044
]
HU773_000265 (tssK)
Secretion system [BR:
pshh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU773_000265 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXH89352
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Position
complement(56587..57921)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEPLG
AARYLSQVREVRDDNAPFENRAPVAVGSRALRLLTAADGISDYAAIGLVRIKEKRADRAL
VLDDSYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQSSPLHPERLFSELVSLAGEFSTFSTSGRRPEEYPRYQHDDLALSFAP
VMQALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLIDSASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQIPYHAGSTYYELDRGSEHWQQLIH
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttacctggaaaacctgattgatgcccgcagccgcccgctgtcggcc
ggcgcctgggggttttccgaactgctgatcgaccagggcctgctggcccagggcaagctg
gccattgtctcggcccgtggcctgttgcccgatggcacgccgttcaatatcccccaggat
gacctggcgccgagcccgctgaacatcgacgacaacctgcgtgacggcctggtgtacctg
gccttgcccctcaagcgtgccggtgcccgcgatacggtcgacgaaggcgagcccctgggc
gctgcgcgttacctgagccaggtgcgcgaggtgcgggatgacaacgcacccttcgagaac
cgcgcaccggtggccgtcggctcccgtgccttgcgcttgctgaccgccgccgatggcatc
agcgactacgccgccatcggcctggtgcgcatcaaggaaaaacgcgccgaccgcgccctg
gtgctggatgacagctacatcccgccggtgctcgatgtggccgcgagcaagccgctgacg
gcgtttcgcagcgaactgctgggcctgttgcaccagcgcggcgaagccctggccgggcgg
gtggtggcctcgggtgccggtggcgcctcggagattgccgacttcatgctgctgcaactg
gtcaatcgcgcccagccgctgatccagcacctgagccagtcgagcccgctgcacccagag
cgtttgttcagtgaactggtaagcctggccggcgagttctcgaccttctccacctcgggg
cggcgccccgaggaatacccgcgctaccagcatgacgacctggccctcagcttcgccccg
gtgatgcaggccctgcgcgaggcgctgtcgatgctgatcgacagcaaggccacgcctatc
ccgattgtcgaaaaagcctatggcgtgcatgtggcgatgctggcggacaaaaccctgatt
gacagcgccagcttcatccttgtggtgcgtgccgatgtcccgggcgaaaccctgcgtgcg
cgcttcggccagcagagcaaggtcggctcggtggagcacatccgcgacctggtcaacctg
caactgccgggcatcggcctgctgccgttgccggtggcgccacggcagatcccttaccac
gcgggctccacctactacgagctggatcgcggcagtgagcattggcagcaactgattcac
tccggcggcttcgccttccatatcgccgggcagttcccgggcttgaacctggccttctgg
gcgatccgaggataa
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