Pseudomonas shahriarae: HU773_000695
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Entry
HU773_000695 CDS
T07642
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh03420
Nucleotide excision repair
pshh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU773_000695 (uvrD)
03430 Mismatch repair
HU773_000695 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshh03400
]
HU773_000695 (uvrD)
Enzymes [BR:
pshh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HU773_000695 (uvrD)
DNA repair and recombination proteins [BR:
pshh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU773_000695 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HU773_000695 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Viral_helicase1
RHH_1
Motif
Other DBs
NCBI-ProteinID:
QXH89433
LinkDB
All DBs
Position
153114..155297
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSDDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRLLIANKGLTGRAAGALGGFVELIDSLAAKCLEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENSEEDADLSPLAAFLGHA
SLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETPFSLGQQVRHAIFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttttgctgaactccctcaacgatgcccaacgccaggccgta
gcagcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgcgtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtccccgcattcgatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccgggatgtgggtcggcaccttccacggcctggcgcaccgcctgttg
cgggcccactggcaggaggcgggcctggcccagaccttccagattctcgacagcgatgac
cagcaacgcctggtcaagcgggtaatccgcgagttgggcctggatgaacaacgctggccg
gtccgccaggcccagtggtttatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagtggcgacctgttcctggccaccatgcgcagcatttatgaagcctatgaa
gtggcctgccagcgagccggcgtcatcgacttctccgaactgctgctgcgcgccctcgac
ctgtggcgtgacaaccccggtttgctcgcgcactaccagaagcgcttccggcacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctaccagtactccgacgacttccccgacgccgagactattcgc
ctggagcagaactatcgctccaccgccgggatcctcaaggccgccaacgccttgatcgcc
aataacaccgggcgcctgggcaaggagttgtggaccgatggcggcgaaggcgaggcgatc
aacctctacgccgccttcaacgagcacgacgaagcgcgctatgtggtcgaaaccattgaa
agcgccctgaaaaccgggctggcccgcagcgatatcgctattttgtaccgttccaacgcc
caatcgcgggtgttggaagaagccttgctgcgcgagcgcatcccgtatcgcatctatggc
ggccaacgcttcttcgagcgtgcggaaatcaagaacgccatggcctacctgcgtttgctg
gaaggccgcggcaacgatgcagcgctggagcgggtgatcaacgtaccggcacggggcatc
ggcgagaaaaccgtcgaggcgatccgcgagcatgcgcgtcacagcgatgtgtcgatgtgg
gaggccatgcgcctgctgatcgccaataaaggcctgaccggccgcgctgccggggctttg
ggtgggtttgtcgagttgatcgacagcctcgccgccaagtgcctggaaatgccgctgcac
ctgatgacccagaccgtgatcgaacagtccggcctgattgcttatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcccgcgcg
ttcgagaacagtgaggaagatgccgacctgtcgccattggcggcgttcctcggccatgcc
tccctggaagcgggcgatacccaggccgacgagcacgaagacagcgtgcagttgatgacc
ctgcacagtgccaagggcctggaattcccctacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgccttgaggaagaacgccgcctg
gcctacgtgggtatcacccgggcgatgcagaacctggtgatgacctacgccgagacacgg
cgcctgtatggcagcgaaacctacaacaaggtctcgcgtttcgtacgggaagtgccgaaa
gggctgattcaggaagtgcgcttgtccaatagcgtcagccggccgtttggcggcggccag
cagcagaactccagcagcatgtttgccggttcggaaattcccgagaccccgttcagcctt
ggccagcaggtcaggcatgcgatctttggcgaaggggtgatcctcaacttcgaaggcgcc
ggggcccaggcccgagtgcaggtgaacttcgccgaaggcagcaagtggttgatgatgggt
tacgccaagctcgaagcggtctga
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