Pseudomonas shahriarae: HU773_002040
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Entry
HU773_002040 CDS
T07642
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HU773_002040
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QXH89682
LinkDB
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Position
complement(451513..453849)
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AA seq
778 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRVSILASIQEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLTPETEAARFVDGEKGVADVKAALEGAKYILMERFAEDANLLEKLRN
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLSEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTIAILAALCAKHAVDLIAIGNGTASRETDKLALELIKKYPGMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNKVGVDVNTASVALLARISGLNSTLAQNIVTHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDP
KKYTDETFGVPTITDILQELEKPGRDPRPEFRTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQNRSENTAPRKEATTAAPANNAMASLFANAKQLKKR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggctccaccgtgcccttcatcgcccgttaccgtaaa
gaagtgaccggcagcctcgatgatatccagctgcggcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgtgtcagcattctcgccagcatccaggagcagggcaag
ctgaccccgcaactcgaacgcgatatcaagctcgccgacaccaagacccgcctcgaagac
ttgtacctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgacggtctgttcaacgacccgtccctgaccccggaaaccgaagcc
gcgcgctttgtcgatggcgaaaaaggcgtggccgacgtcaaggccgccctcgaaggcgcc
aagtacatcctcatggagcgtttcgccgaagacgccaacctgctggaaaaattgcgtaac
tacctgaaacaggaagccaccctcagcgcccgtgtgatcgccggcaaagaggaagaaggc
gccaagttccgcgattacttcgagcacgacgaaccactgaaaagcatgccgtcccaccgc
gccctcgccattttccgcggccgcaacgaaggcattctcagctccgcgctgaaggtcggc
gacgaactgccgggcaccatgcacccgtgcgaaggcatgatcggccaacaattcggcatc
cagaatcagaatcgtcctgcggataaatggctcagtgaagtcgtgcgctggacctggaag
gtcaagctctacacccacctggaaaccgacctgctgggcgagctgcgcgacggcgccgag
accgaggcgatcaacgtattcgcccacaacctgcacgacctgctgctggccgctccggcc
ggcccgcgcgcaaccctgggcctggacccgggcctgcgcaccggttgcaaggtcgccgtg
gtcgacgccaccggcaagctgctggaccacgccaccgtgtacccgcacgtgccgcacaac
aagtgggaccagaccatcgccatcctcgccgccctgtgcgccaagcatgcggtagacctg
attgccatcggcaacggcaccgccagccgcgaaaccgacaagctggccctggaactgatc
aaaaaatacccaggcatgaaaatgaccaaggtcatggtctccgaggcgggcgcttcggtg
tactcggcgtcggaactggcctccaaggaattcccggacctcgacgtgtcgatccgtggc
gcggtgtccatcgcacgccgcctgcaggatccactggccgagctggtgaagatcgaccct
aaatccattggcgtcggccagtaccagcacgacgtgtcgcagctgaaactggcgcgcggc
ctggatgcagtggtggaagactgtgtgaacaaggtcggcgtcgacgtcaacactgcctcg
gtcgccctgctggcgcggatttccggcctcaactccaccctggcgcagaatatcgtcacc
catcgcgatgaaaacggcgcgttcaagacccgagcggcgctgaaaaaagtcgcacgcctt
ggcgaaaaaaccttcgaacaggccgccggcttcctgcgcgtgatgaacggtgacaacccg
ctcgacgcctcggcagtccacccggaagcctatccgctggtacagcgcatcgccgctgaa
accgaccgcgatatccgctcgctgatcggcgacgccgcgttcctcaagcgcctggatccg
aagaagtacaccgacgaaaccttcggtgtgccgaccatcaccgacatcctgcaagaactg
gaaaaaccgggtcgcgacccgcgtccggagttcaggaccgccgagttccaggaaggcgtc
gaagacctcaaggacttgcaactggggatgattctcgaaggcgtggtgaccaacgtgacc
aacttcggcgcatttgtggatatcggtgtgcatcaggacggtttggtgcatatctccgcg
ctttcagagaagttcatcaaggatccgcgtgaggcggtgaaggccggggatgtggtcaag
gtcaaggtcatggaagtggatatcccgcgcaaacgcgtgggcctgtcgatgcgcatgagc
gatacccccggcgagaaaatcgacggtgcccgtggcgcacgcccgggttcagcgccgcgc
cagtcgcaaaaccgttcggaaaacactgcaccgcgtaaggaagccaccaccgcagccccg
gccaataacgccatggcttcgctgttcgccaacgccaagcagttgaaaaagcgctga
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