Pseudomonas shahriarae: HU773_002175
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Entry
HU773_002175 CDS
T07642
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh00521
Streptomycin biosynthesis
pshh00523
Polyketide sugar unit biosynthesis
pshh00525
Acarbose and validamycin biosynthesis
pshh00541
Biosynthesis of various nucleotide sugars
pshh01100
Metabolic pathways
pshh01110
Biosynthesis of secondary metabolites
pshh01250
Biosynthesis of nucleotide sugars
Module
pshh_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU773_002175 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU773_002175 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HU773_002175 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU773_002175 (rfbB)
00525 Acarbose and validamycin biosynthesis
HU773_002175 (rfbB)
Enzymes [BR:
pshh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HU773_002175 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QXH89706
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Position
complement(480920..482002)
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AA seq
360 aa
AA seq
DB search
MRILVTGGAGFIGSALIRHLIQNTEHEVLNLDKLTYAGNLESLTSIATDSRYEFVQADII
DQATVSAVLARFQPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEATRAYWQQLAE
PAKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKALPVYGDGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQKNIDVVRGICALLEELAPQRPAGVAQFTDLITFVKDRPGHDQRY
AIDASKIERELGWVPEETFESGLRKTVQWYLDNLEWCRRVQDGSYQGERLGNTEAKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcttgttaccggtggtgccggttttatcggttccgcactgatccgccatttg
attcaaaacactgaacatgaagttctcaacctcgacaaactgacctacgcgggcaatctt
gagtcgctgaccagcatcgcgaccgacagccgctatgagttcgtccaggccgatatcatc
gaccaggccaccgtcagtgcagtcctggcacgcttccagccccaggccatcatgcacctg
gcggccgagtcccatgtcgaccgttccatcgacggtccgtcggactttatccagaccaac
atcgtcggcacctacagtctgctggaagccactcgcgcctactggcagcagttggcagag
ccggccaagagcgccttccgcttccatcacatttccaccgacgaagtgtatggcgacctg
catggtgtggatgacctgttcaccgaaaccacgccttacgcgccaagctcgccttactct
gcgagcaaggccgcgtccgaccacctggttcgcgcctggcagcgtacttacggtttgccg
gtgctgctgaccaactgctcgaacaactacgggccgttccacttccccgagaagctgatc
ccgctggtgatcctcaatgccttggcgggcaaggccctgccggtatacggcgatggcttg
caagtacgtgactggctgtttgtcgaagaccacgcccgcgcactgctcaaagtcgtcacc
gaaggtgtggtgggcgagacttacaacatcggcgggcacaacgagcagaagaacatcgac
gtggtgcgtggcatctgcgcactgctcgaagaactggcgccacagcgtccggccggcgtt
gcccagttcaccgacctgatcaccttcgtcaaggaccgtccaggccatgaccagcgctac
gctatcgacgccagcaagatcgagcgcgaactgggttgggtcccggaagaaaccttcgag
agcggcctgcgcaagaccgtgcagtggtacctcgacaacctggaatggtgccgccgggtc
caggacggcagttatcagggcgaacgcctcggtaacaccgaagcgaaggacctgattgca
tga
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