Pseudomonas shahriarae: HU773_004445
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Entry
HU773_004445 CDS
T07642
Name
(GenBank) DUF3883 domain-containing protein
Organism
pshh
Pseudomonas shahriarae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOV_C
DUF3684
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QXH90135
LinkDB
All DBs
Position
complement(1021397..1026208)
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AA seq
1603 aa
AA seq
DB search
MGKEMDQLARPHISGSYTANLLGNIRSHLAGLQGYDVMALELIQNADDAKAESVVFDVTD
QGLVVFNSGQFTYCGGLDRPCAFLAEGSYKCDYHRITDVGSGGKLTRGENIGRFGIGFVS
TYQVTDHPEIRSAGIKLTLHPEKGQWFIEPLQQPEGTTFFLPWADDPNTDARLALGVSHV
STAHIDQLVDDFQKVLRKSLLFLRHVRTAELRRNGELLLACDLERGDGSDLIISFRPSGE
VEQWHILRADAAESAARLYASHPRLESLGRGTKISIGLRIDPEPLAEGLLYAFLPTEQST
GLPLHINADFFPESDRKAVIFAGHQHEQAWNEMLIDVAATELARDPEGLLRMLGDVQCWQ
IMARTFDLSRPSNHPACFKRFWERMLATATQARIAPAQDGGVHVPSGVFFPDKALNSAQV
SVLKEVGGQVITEDLRPFRTAVNQLGAPFLTFERLVGLLEQAMSPQAAGALQVEEERLGG
FYRPLWGMINELFPEAITPPPATKAAIQRLQAIPFVVTEDLYAVTITQSFVAPAALEVGR
VASLLPRLAIASRHVFGFPKIARQIRQLELGAVVRHIGSLCATDAIEDVIGVEQEELRDL
YAMFADLDRYGDVDAAVYQSLRNLPIWFSSRGLIKASQALLPGNFTDPTGQADLLETSVL
SASAREFVSSKLGVQTQTIEAFVQNVLPRFFNEKGPLDASKYARLIGEIANYPALVNDER
IRRLLGALPIIPTQDGNWSHPTKTYRRTDDLVKVLGDATSLWVDTSRVPNTRSVHSFIES
IGLRRSPMAEHLVERMLFIAEKFLPTEDAKRASSEAFYVLCDRFDEWKEQSFFQDAINSL
KRSACFPAIDDGEDWYSANSLYAPYRAEAFSSQASVLDFRNMARLNRDLLKKLNVALEPE
TSLVINHLRHCVAKKSPAPFTTYQILNERSKDEGSSISTLSGEPFIYIESQKSYVRSNQL
FWMPQQLGRYAFTIPGNLEAFKPLFNAIGVKNAPEGRDYVDILLDIVAEYFEQSKPVTGV
DRSVYEACLIGIAASDEREELGALDIQRLQDAPTILNLIGQPTHPDEVLLQDSEWHAGFF
NGELDLTLCKPAPELWPILEKIGVRRLSESAEVALEFVDGQKAEEPQLAEKLMERIGILT
RLLHDKPTTVQKKIREAIWKLKAISHEVVRVQSSVRVVGDGNAAPPRLSEPKRTQAFYDI
EKQQLIVERPVVDRSWPHVLNAIFHQLMPEESGNEILKLTGMAGPRMRMSVEEAHQDLTD
SGFPHLEAEEDSSPEDDLTSSSLDDLGGTTEPGGQPESKPDGASVDVTKGGERAPNRPGT
SQPTGDPNAPPKNVPPPNKRRPQTGSNGAREMDVPDGDRANGHDHRTDSPIGSAERAKRP
RPKHKEQWDRRLLSYVRRRHVDFPDADEQEGSSEHNLAVEVVARAAVCAYERSRGRVAEQ
MAQTHPGYDIISRNPLTGEDRFIEVKGVNGEWNQTGVGLSRLQFSNAQDYGDRYWLYVVE
FVSDPEHTRVHAIRSPATQVTSFMFDGNWRDAVAEERDDPALAFIAGARVKHQHFGIGRI
ESMDLRGSTRVMSIEFETSGRRTVTLNLQTMTVVEDTDDNDNS
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaaatggatcaattggccagaccgcacatcagcggctcgtacaccgcgaac
ctgcttggaaacatcagaagccacctggcgggacttcaaggctatgacgtcatggccctt
gaactcattcagaacgcagacgacgcgaaagcggagtcggtggtttttgacgtcaccgat
cagggactcgttgtattcaatagcggtcagttcacctactgtggcggcctggacaggccg
tgcgcctttcttgccgaaggtagctataagtgtgactaccaccgaatcacggatgtcggc
agcggtggaaagctcactcgtggtgagaacattggccgctttggtatcggcttcgtctcg
acctatcaggtcacggaccacccagagatccgatccgctgggatcaaactgacattgcac
cccgaaaaagggcaatggttcatcgaaccactccagcagcccgagggcaccactttcttc
ttgccctgggcagacgacccgaatactgatgcacgcttggcgctcggggtgtcacacgtc
agcaccgcacacattgatcaactcgtagacgattttcaaaaggtcctgcgcaaaagcttg
ctgttcctgaggcatgttcggactgcagagctgcggcgaaatggcgaactgctgttggct
tgcgatctggagcgcggggacgggtctgatctgatcattagttttcgcccgagtggtgag
gtggagcagtggcacatcttgcgggctgatgctgcggagtctgcggctcgtctgtatgcc
tcacacccccgacttgagtcccttggtcgaggcaccaagatcagcattggcttgaggatc
gatcccgagccgctcgccgagggactgctctacgcgttcctgccaaccgaacagtcgacc
ggtctgcctctgcatatcaatgcagacttctttccagagtctgatcgaaaggccgtgatt
tttgctgggcaccagcatgaacaggcctggaatgagatgctcattgatgtcgcggcaaca
gagctggccagagaccccgagggtcttctcaggatgctcggcgacgttcagtgttggcag
atcatggcgcgaacgtttgatttgtcgagaccgtcaaatcacccggcttgcttcaagcgg
ttttgggagcggatgctggccacagccactcaagctcgcattgctcctgcacaggatggg
ggggttcacgttcccagcggcgtattcttccctgataaagcactgaactctgctcaagtc
agtgtattgaaggaagttggcgggcaagtcatcaccgaggatttgcggccgttcagaacg
gcagtcaatcagttgggcgccccatttctgacgtttgaacgccttgttgggctgcttgaa
caagccatgtcaccacaggcggctggcgcactacaggtggaagaagaacgccttgggggc
ttctatcgtccgctatggggaatgattaacgagttgttcccagaggcaataacgccccct
ccagctacgaaggcagccattcagcggttgcaggcaattccctttgttgtcacggaagac
ctgtacgccgttacaatcactcaatcctttgtcgcgcccgctgcgctggaagttgggcgg
gtagcgtcgctactgccaaggctggctattgcatcgcgccacgtcttcggattccccaag
atcgcacgacaaattcgacaacttgagctcggtgccgttgtccgccacatcggctcattg
tgcgccaccgatgccatcgaggatgtcatcggcgttgagcaagaagagttgcgtgacctg
tatgcgatgtttgctgatctggatcgctacggcgatgttgacgcagcggtgtatcagtct
cttcgaaatctgccaatctggttttcaagccgaggtctgatcaaagcgtcacaagcgcta
ttgccggggaatttcaccgatcctactggccaggccgatcttctagaaacctctgttcta
tctgcttccgcgagagagttcgtgtcgagcaaactcggcgttcagacgcagactattgaa
gcgttcgtacaaaatgtcttgccgagattcttcaatgagaaaggacctctggatgcatct
aaatacgcccgccttattggcgaaatagccaactatccggcgctcgtgaatgatgaaaga
atccgccggctattgggggcactgccgatcattcccacgcaggacgggaattggtcacac
cccacgaaaacctacagacgcaccgatgatttggtgaaggttcttggcgatgctacgagt
ctttgggtcgacaccagtcgtgtgccaaacacccggtcggtccattctttcattgagagc
attggacttcgtcgctcccccatggcagagcatctggttgagcggatgcttttcatcgca
gaaaaattcctgccgaccgaagatgcaaaaagagccagcagcgaggccttctatgtcctg
tgcgaccggttcgatgaatggaaggaacagtcgttttttcaggacgccataaacagtctc
aaaagatcggcatgcttccccgcgattgatgacggcgaggactggtattccgcgaactct
ctgtatgcgccttaccgtgccgaagccttctcatcacaagcgtcagtgctcgattttcgg
aatatggcaagactcaatcgggacttgctgaagaaactgaacgttgcgctggagccagaa
acttcgctggtcatcaatcaccttcggcattgcgtagcaaaaaaatcaccagcacctttc
accacgtatcagatactcaacgagagatcgaaagacgaaggctcttccatttcgacgctg
tctggggaaccgttcatctacatcgaaagccagaagagctatgtgagatccaatcagctt
ttctggatgcctcagcagcttgggcgctatgcgttcaccattccaggcaacctcgaagcg
ttcaagcccttgttcaatgcgataggggtaaagaatgcccccgaaggtcgggactacgtc
gacatcctgctggacatcgttgctgagtatttcgagcaatcgaagcccgttacaggggta
gatcgatctgtttacgaagcctgccttatcggcatcgcagcctcagatgagcgcgaagaa
ctgggcgccttggacattcaaaggctgcaagacgcgccgacgatacttaacttaatcgga
cagccaacgcaccctgacgaggtgcttcttcaagacagtgagtggcacgcaggtttcttc
aacggggagcttgacctgacactgtgcaaacctgctcccgagctgtggccaatccttgag
aagatcggcgttaggcggctcagtgagagcgctgaggtcgcacttgagttcgttgatggt
caaaaggcagaggagccgcagcttgccgagaagctgatggagcgtatcggcatccttacc
cgattgcttcacgacaaaccgaccacagtccagaagaagattcgagaagcaatttggaag
ctgaaagccataagccacgaagttgtccgtgttcaatcgtctgttcgcgtcgttggggat
ggaaacgcagctccgcctagattgtcagaacctaaacgcacccaagcgttttatgacata
gagaagcagcagttaatcgtagagcggccagttgttgatcggagttggccgcatgttttg
aatgccatcttccaccagttgatgccggaagagtcaggcaatgaaatactcaaactcacc
ggcatggcgggaccacgcatgcggatgtcagtcgaggaggctcatcaagatctaacagac
tcgggttttccgcatctcgaagcagaggaggactccagcccagaagatgatttgacctcg
tcgagtttggatgatttgggaggcacgacagagccggggggccagccagagagcaaaccg
gatggcgcgtcagttgatgtgacaaaaggtggagagcgcgcaccgaatcggcctggtacg
agtcagccgacaggtgatccgaatgctcctcccaagaatgtgccgccgcccaataaaagg
cggcctcagaccggttctaacggcgcacgagaaatggatgtacctgatggtgaccgggct
aatgggcacgaccacagaaccgattcgccgattggcagcgccgagcgtgctaagagaccg
cgtccaaagcacaaggagcaatgggatcgacgactgctttcttatgttcgaagaaggcat
gtggattttcccgatgcggacgagcaggaaggttcgtctgaacacaaccttgcagttgaa
gttgtagctcgagcagctgtctgcgcctatgagaggtcccggggacgcgtcgctgaacag
atggcccaaacccacccgggctacgacatcatcagccgaaatccattgacaggcgaagac
cgtttcatcgaggtaaagggcgtcaacggcgagtggaatcagacaggcgtgggtttgtcc
aggctgcagttcagcaacgcccaagactacggtgatcgctactggttgtacgtggttgag
tttgtttctgaccctgagcacacccgcgttcacgccattcgtagtcctgccacgcaggtg
acatcgttcatgttcgacggcaactggcgcgatgctgttgcagaggagcgcgatgaccca
gcacttgcatttatcgcgggagcaagggtcaaacaccagcactttggcattgggcgaatt
gaatcaatggatttacgaggttcaactcgtgtgatgtccattgagtttgagaccagcggt
cgacgcacggtcactttaaatctgcagacgatgacggtggttgaagataccgatgacaat
gataattcctga
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integrated database retrieval system
