Pseudomonas shahriarae: HU773_004690
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Entry
HU773_004690 CDS
T07642
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pshh03016
]
HU773_004690 (truB)
Enzymes [BR:
pshh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HU773_004690 (truB)
Transfer RNA biogenesis [BR:
pshh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU773_004690 (truB)
Prokaryotic type
HU773_004690 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXH90179
LinkDB
All DBs
Position
1082040..1082957
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAALPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccc
attggttttacctccaatgcggcgttgcagaaggtccgctggctgctcaatgccgaaaag
gccgggcacactggtagcctcgaccccctggctactggcgtgttgccattgtgctttggc
gaggccaccaagttctcgcaatacctgctcgattcggacaagggttacgaaacccttatg
cagctgggcaagaccaccaccacggcagacgccgaaggtgatgttctgcaggttcgcgac
gtgaccgttggtcgtgcagatatcgaggctgccttacccgcttttcgtgggcaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatggccagcctctttacaagctggca
cgtgcgggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctcgcctgtgaaggcgacaccgcccgcttggccgtggactgcagcaaaggcacctatatc
cgtaccctggtggaagatattggtgaacagctcggttgcggcgcgtacgttgcagaactg
cgacgcacccaggctggccctttcaccctggcccagacggtcacgttggaagagttggaa
gctgtacatgccgaaggcggcaatgaagcagttgatcgcttcctgatgccatcggacagc
ggtttgctggattggccattgctgcacttctcggaacacagcgcgttctactggctcaac
ggccagccggtccgcgcaccggatgctccgaagttcggcatggtgcgggtacaagatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcgg
ctgattcggtcagaatga
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