Pseudomonas shahriarae: HU773_004750
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Entry
HU773_004750 CDS
T07642
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU773_004750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshh03019
]
HU773_004750
Enzymes [BR:
pshh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HU773_004750
Messenger RNA biogenesis [BR:
pshh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HU773_004750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QXH90191
LinkDB
All DBs
Position
complement(1098048..1099445)
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AA seq
465 aa
AA seq
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MLKKLFQSFRSPLRRTQHIRSTPEVLNSNQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPTQRYQEDPVRMLRAVRFAAKLNFGIEKHTAAPIRELAPMLREIPSA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPTSADALEHNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQNRGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERREMIRELSSKGEPTGDGPKKRRRSSGSKRKRSAADTSGE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttcccccttgcgtcgtacgcaacacattcgc
agcacgcctgaagtgctcaacagcaatcaacattcgctgcagcgcgcccagttcagccgt
tatgcggtgaacatcgtcgaacgcctgcagaacgctggctaccaggcctacctggtcggt
ggttgtgtgcgcgacatgttgctcaacatcactcccaaggatttcgacgtcgccaccagc
gccacgcctgaacaagtgcgcgccgagtttcgcaacgcgcggatcatcggtcggcgcttc
aagttggtgcatatccactttggtcgcgagatcatcgaggtcgccaccttccgagcaggc
cacccgcaaaacgatgaagaggaagacagcaaccagtcttcccgcaacgaaagcggacgc
atcctgcgggacaatgtgtacggcaccctggaagaagacgcgcaacgccgcgacttcacc
atcaatgccctctattacgatccggtcagcgagcgcatcctcgattacgccaacggcgta
cacgatattcgcaaccacctgatccgcctgatcggcgaccctacgcagcgctaccaggaa
gacccggtgcgcatgctgcgggccgtgcgctttgccgccaagctgaacttcggcatcgag
aaacatacggccgcgccgattcgcgagctggcgccgatgctgcgggaaatcccttcggca
cgcctgttcgaggaagtgctcaagctgttcctttccgggcatgccgccgacaccttcgaa
atgctggtggacctgcagttgttcgacccactgttcccgaccagcgccgatgcactggag
cacaaccccacgtacacccacacgctgatcagtgaagcgttgatcaacactgacctgcgg
atcaaacagaacaaaccggtgaccccggcgttcctgtttgccgccctgctctggccggca
ctgcccgcccgcgtgctgcgcctgcagaaccgtggcatgccgccgattccagcgatgcag
gaagcggcgcacgagttgatcgccgagcaatgccagcgcatcgcaatccccaagcgtttc
accatgccgatccgcgagatctgggacatgcaggaacgcctgccacggcgcagtggcaaa
cgtgccgacctgctgctggacaacccgcgcttccgtgccggctatgacttcctgctgctg
cgtgaaagcgccggcgagcagactgatggcctgggcgaatggtggaccgactaccaggac
gccaatgacagcgaacgtcgcgagatgattcgtgaactgagcagcaaaggcgaacccact
ggcgacggcccgaaaaagcgccgccgcagcagcggtagcaaacgcaagcgcagtgccgcc
gatacctctggcgaataa
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