Pseudomonas shahriarae: HU773_006145
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Entry
HU773_006145 CDS
T07642
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshh03009
]
HU773_006145 (der)
Ribosome biogenesis [BR:
pshh03009
]
Prokaryotic type
GTPases
HU773_006145 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
Ras
ABC_tran
DUF5906
AAA_24
cobW
AAA_18
NTPase_1
SRP54
NOG1
SRPRB
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
QXH90449
LinkDB
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Position
1377655..1379124
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLIANKI
DNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLEIALRDFPKDDAEEVEGEEEIVAEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYASV
QNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQIE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNSLTDRQVNKKRRLMSHNKK
ADKKRKDRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgacctaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgtgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggcaaagtggcaagggcgctcctatattattgtcgacaccggtggtatc
tccggtgacgagcatggcatggacgaaaagatggccgagcagtcgctgctggccattgaa
gaagccgatgtcgtgttgttcctggtggacgcccgtgcgggctacaccgccgccgaccag
atgatcggcgagcacttgcgcaaacgtaacaagcgctcctatttgatcgccaacaagatc
gacaacatcgatcctgaagcggcccgtgccgaattcagcccgatgggcctgggtgacgcg
attcctgtcgccggtgcccacggtcgcggtatcacccagatgctggaaatcgccctgcgc
gacttccccaaggatgacgccgaagaagttgaaggcgaagaagagatcgtcgctgaaggt
gaggaagccaagcgcattcctggcccgagtgaaaaagacgggatcaagatcgctatcatc
ggccgccccaacgtgggcaagtcgaccctggtcaaccgcatgctcggtgaagaccgggta
atcgtctacgaccagcccggcaccacccgcgacagcatctacatcccgttcgagcggaac
gacgagaagtacacgctgatcgacaccgccggtgtgcgcaagcgcggcaagatccacgag
gaagttgaaaagttttcggtggtcaaaaccctgcaggcgatcaaagacgccaacgtggtg
atcttcgtgatggacgcccgcgaaggcgtggtcgaccacgacctcaacctgctgggcttt
gccctggaggctggtcgggcattggtgatcgcgatcaacaaatgggacggcatgacccca
agcgagcgtgacttcgtcaaggtcgagctgcagcgccggttgttcttcgtcgacttcgcc
gatatccactttatctcggcgctgcacggtactggcgtgggcaacctctacgcttcggta
cagaactcgttcaagtcggcggtcacccgctggccgaccaatcgcctgacccagatcctt
gaagacgcggtgggcgaacacgcgccaccgatggtcaacaaccgccggatcaagctgcgt
tacgcccacttgggtggtgccaacccgccgattatcgtgatccacggtaaccagatcgag
aaggtgcccaagtcctacgtgcgttacctggaaaacacttaccgccgtgtcttgaagctg
gtcggcacaccgatccgcatcgagttcaaaggtggcgagaacccgtacgaaggtaacaag
aacagcctgactgaccgccaagtgaacaagaaacgtcgcttgatgagccacaacaaaaag
gctgacaaaaagcgtaaagaccgccgctga
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