Pseudomonas shahriarae: HU773_006170
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Entry
HU773_006170 CDS
T07642
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HU773_006170 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshh03400
]
HU773_006170 (xseA)
Enzymes [BR:
pshh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HU773_006170 (xseA)
DNA repair and recombination proteins [BR:
pshh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HU773_006170 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4807
Motif
Other DBs
NCBI-ProteinID:
QXH90454
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All DBs
Position
complement(1385022..1386401)
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AA seq
459 aa
AA seq
DB search
MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVALPAHPRRIGIISSPTGAVIRDIISVFGRRAPNVQLTLIPT
AVQGREAVAQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDASNLVRQVESLHRRLVMLMRNRLTHDRLR
LEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHPGRQL
ALLRQRLDSLAERLPRAMREGLKARRLQLQSQVQTLQVVSPLATLGRGYSILLDERGQAI
RNAAQTHTGQRLTARLGEGQLQVRVEDNHLTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagacccgtttgcccgcctgggcctggaccgcgaagtcctgactgtcagccag
ctcaacggccgcgcgcgggtgttgctggaagacgtgttcaccaatatctgggtcgaaggc
gagatctccaacctcgcccgccccgcctccggccatgtgtacttcaccctcaaggacagc
ggcgcacaggtgcgttgtgcactgtttcgcaacaatgccgcacgggtgcgtcaggcgctg
aaggatggcctggcggtcaaggtgcggggcaaggtctcgctgttcgagggccgtggcgac
tatcagttgatcctcgacaccgtggaaccggccggtgatggcgcgttgcgcctggccttc
gatgccttgaaggaaaagctcagcgccgaaggcttgttcagtgccgagcgcaaggtggcg
ctaccggcccatccacgccgcatcgggattatcagctcgcccacgggcgcggtgattcgc
gacatcatcagcgtgttcggccgccgtgcaccgaacgtgcaactgaccctgatccccacc
gccgtgcaaggccgcgaagccgtggcgcagattgtccgcgccctcaagctggcggatgcc
cgtggcttcgacgcgctgatcctggcccgtggcggcggctccctggaagacctctggtgc
ttcaacgaagaagccgtggcgcgggccattgatgcctgtgtcacgcccatcgtcagtgcg
gtcggccatgagaccgatgtgtccatcagtgacttcgtggccgatgtgcgtgcgcctacg
ccgtcggcggcggctgagttgctggcgccggatgcgagcaatctggtgcgccaggtcgaa
agcctgcaccggcgcctggtgatgctgatgcgcaatcgcctgacccacgaccgcctgcgc
ctggaaggcatggcccgccgcctgcgtcaccccggtgagcgcctgcgccagcaggcccag
cgcctggatgacctggatatgcgcctgcgccgcgcgttcgagcgcagcctcaacacccgc
cgcgaacgcctgatccgcctggaaacgcgcctggccggccagcatccggggcggcaactg
gccctgctgcgccagcgcctggacagcctcgccgagcgcctgccccgggccatgcgcgaa
gggctcaaggcccgtcgtctgcaactgcaaagccaggtgcagacgttgcaggtggtcagc
ccgctggcgaccctgggccgtggctacagcatcctgctggacgagcgcggccaggcgatt
cgcaatgccgcgcaaacccacaccggccaacgcctgaccgcgcgcctcggtgaaggccaa
ttgcaagtgcgggtggaagataaccacctgacacccgtcaccctttcattactggattga
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