Pseudomonas shahriarae: HU773_006830
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Entry
HU773_006830 CDS
T07642
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pshh03016
]
HU773_006830 (truD)
Enzymes [BR:
pshh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HU773_006830 (truD)
Transfer RNA biogenesis [BR:
pshh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU773_006830 (truD)
Prokaryotic type
HU773_006830 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QXH90584
LinkDB
All DBs
Position
1539646..1540704
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AA seq
352 aa
AA seq
DB search
MNDLQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTARHKR
KLQRGAHAANGFTLRLTQLVGDHAAIDARLQLIAQQGIPNYFGAQRFGHNGGNVVDARDW
ATRKALPEQRNVRSRLLSTARSFVFNKVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGESPASGATHALEQTVAASEADLCDWLAKAGMSQERRI
LRLPIGGLTWHYPETDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgcaactgttggggccgcgggcctatggtgaagcactgggcagcgcggta
ctcaaggcgacggctgaggacttccaggtggacgaggtgctggatatcccgctgaccggc
gaaggcgagcacctgtggctgtgggtggaaaagcgtggcctgaacaccgaagaggccgcg
cggcgcattgccaaggctgccggcgtgcccttgcgcacggtcagctatgccggcctcaag
gatcgccaggcgctgacccgccagtggttcagcgtgcaactgcccggcaaggccgatcca
gacctgagcgcggcggaaaacgacaccctgaagatcctcaagaccgcccgccacaagcgc
aagttgcagcgtggcgcccatgcggccaacggttttaccctgcgcctgacccaactggtc
ggtgaccacgccgcgatcgatgcgcgcctgcaactgatcgcccaacagggtatccccaac
tatttcggcgcccagcggtttggccataacggcggcaacgtcgtcgatgcccgcgactgg
gcgacccgcaaggccttgccggagcagcgcaatgtgcgttcgcgcctgctgtcgaccgcg
cgcagctttgtgttcaataaagtgctggcggcgcgggttgccgatggttcatggcagcgc
gcccaggtcggtgacttgctggcgttcaccgacagccgcagctttttcccggccggggag
gcggagtgcagcgatccgcgcctggccatcctcgacctgcatcccaccggcccgcagtgg
ggtgaaggcgaatcgcccgccagcggcgccacccatgcgctggagcaaaccgtcgcagcg
agcgaagcagacctgtgcgattggctggccaaagccggcatgagtcaggagcgacgcatt
ctgcgactgcccattggcgggttgacgtggcattatcccgagactgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgttttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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