Pseudomonas shahriarae: HU773_008035
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Entry
HU773_008035 CDS
T07642
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HU773_008035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshh02000
]
HU773_008035
02044 Secretion system [BR:
pshh02044
]
HU773_008035
Transporters [BR:
pshh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HU773_008035
Secretion system [BR:
pshh02044
]
Type I secretion system
Adhesin protein transporter
HU773_008035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
AAA_29
RTX
Motif
Other DBs
NCBI-ProteinID:
QXH90809
LinkDB
All DBs
Position
complement(1782961..1785120)
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AA seq
719 aa
AA seq
DB search
MSQMEPLNPGVDPRQSFDDPLLDGLLILCKLHGCSVSRSSLSAGLPLAQQRLSLDLLPRA
AARASLQARVLRRDLKAISALNLPVLLLLNEGRCAVLRRWCEDGQALILPSEAEGGEQWV
SREELDAAYSGQALFARPRHEIEDLRTPLVPRVEAWFRDTLKLSRWLYSDAILASLLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLVIGLLIGTAFELVLRVVRAHLLDTAGKKTDVI
LSATLFERITGMSMKARPATIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFAVLMLLVIG
LLGGWLVIIPLCAFPLTIGFAMLIQVRLRDTVQKSLSLGAERQALLIETLSGLETLKACS
AESERQHQWESTHGALTRLDSHARNLSALATNGTLFIQQFSGMATIVAGVYSIIAGSLSV
GALVATYMLGSRVLAPLGQIAGLITRYQQAQLTMRSTDALMALPQERDPQQRPLERTQLS
GALEVSQVTFRYAGQNTPALSQVSFQLKAGERVGIIGRSGSGKSTLGRLVMGFYAPEEGQ
LLLDGLDLRQLDVADLRQQVGYVAHDLPLLAGSLRDNLTLGARYISDARMLEVAELTGVS
ELARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPILLLDEPTSAMDNSSEETLR
QRLELWVKGKTLLLVTHRTSMLSLVDRLIVLDNGRIVADGPKESVIDALRKGRVGSAAV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagatggaaccgctgaacccgggtgtcgacccgcgccagagctttgatgacccg
ttgctcgacggcctgctgatcctctgcaagctgcacggctgcagcgtcagccgtagcagc
ctgagcgccggcctgcccttggcgcaacaacgcctgagcctggacttgctgccacgggca
gccgcccgtgccagcttgcaggcgcgggtattgcgccgggacttgaaggccatctcggcg
ctgaacctgccagtgctgttgctgctcaacgaaggccgctgcgcggtgttgcggcgctgg
tgcgaggatggccaggcgctgatcctgcccagcgaagccgaaggcggcgaacagtgggtc
agccgcgaagagctcgacgcggcctacagcggccaggccctgtttgcccggccacggcac
gaaatcgaagacctgcgcacgccgctggtaccaagagtcgaggcgtggtttcgcgacacc
ttgaagctgtcgcgctggctgtacagcgatgcaattctcgccagtttgctgatcaacctg
ctgggcctgatggtgccgctgttcgtgatgcagacctacgaccgcgtggtgccgaaccag
gccacctcgaccttgtgggtactggtgatcggtctgctgatcggcacggcgttcgagctg
gtactgcgggtggtgcgcgcccatctgctggacaccgccggcaagaagaccgatgtgatt
ttgtcagcgaccctgttcgagcgcatcaccggcatgtcgatgaaggcgcgccccgccacc
atcggcggttttgcccagagcatccatgacttccagggcctgcgcgaattcctcaccgcg
gtgacccttaccagcctgatcgacctgcccttcgccgtgctgatgctgctggtgatcggc
ctgctcggcggctggctggtgatcatccctttgtgtgcgttcccgctgaccatcggcttt
gcaatgctgatccaggtacgcctgcgcgacaccgtgcaaaaaagcctgagcctgggcgcc
gaacgccaggcgctgttgatcgaaaccctcagcggcctggaaaccctcaaggcctgcagc
gccgaaagcgagcgccagcaccagtgggaaagcacccacggcgccctcacccgcctcgac
agccatgcgcgcaacctctcggcgctggccaccaatggcacgctgttcatccagcagttt
tccgggatggcgaccattgttgccggggtctacagcatcatcgccggcagcctcagtgtc
ggcgcgctggtggccacctacatgctcggcagccgggtattggcgccgctggggcagatc
gccgggttgatcacccgctaccagcaggcgcaattgaccatgcgcagcaccgacgcgctg
atggccctgccccaggagcgcgacccgcagcagcgcccactggagcgcacgcaactgagt
ggcgccctggaagtcagccaggtcaccttccgctatgccgggcagaacaccccggccctg
agccaagtcagtttccagctcaaggccggcgagcgcgtgggtattatcggccgcagcggc
tcgggcaaaagcaccctgggacgcctggtgatgggcttctacgcgccagaagaaggccag
ttgctgctcgatggcctcgacctgcgccagctggatgtggccgacctgcgccaacaagtg
ggctatgtggcccatgacctgccgctgttggccggtagcctgcgcgataacctgaccctg
ggcgcgcgctatatcagcgatgcgcggatgctcgaagtggccgaactgaccggcgtcagc
gaactggcccgccagcacccacaaggcttcgaccggccagtgggcgagcgcgggcaactg
ctgtccggcggccagcgccaggcggtgttgctggcccgcgcgttgctgctcgacccgccg
atcctgctgctggacgaacccaccagcgccatggacaacagcagcgaagaaaccctgcgc
cagcgcctggagctgtgggtcaagggcaagacattgctgttggtcacgcaccgcacctcg
atgctcagcctggtcgaccgcttgatcgtgctggacaacggccgcatcgttgccgacggc
cccaaagaaagtgtgattgatgcactgcgcaagggccgtgtcggctcggccgccgtctag
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