Pseudomonas shahriarae: HU773_008365
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Entry
HU773_008365 CDS
T07642
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02020
Two-component system
pshh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU773_008365
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HU773_008365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pshh02022
]
HU773_008365
02035 Bacterial motility proteins [BR:
pshh02035
]
HU773_008365
Two-component system [BR:
pshh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HU773_008365
Bacterial motility proteins [BR:
pshh02035
]
Flagellar system
Flagellar assembly proteins
Others
HU773_008365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA_16
AAA
FleQ
AAA_2
HTH_20
AAA_3
HTH_30
MerR
AAA_19
nSTAND3
HTH_23
HTH_24
AAA_22
HTH_11
HTH_28
Sigma70_r4_2
RsiG
AAA_7
HTH_1
DUF2249
HTH_17
ATPase
AAA_14
TIP49
Myosin_head
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QXH90871
LinkDB
All DBs
Position
1866466..1867845
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AA seq
459 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLLLAGHDYRAVGSAEEALQAVEQESFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALIELVARHALG
VVGVADGEGPIAVEPASAQLLELAAKVARSDSTVLISGESGTGKEVLARYIHQQSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRP
LRERPADIVPLAERLLSKHVNKMKHAQARLSAEAQACLISYPWPGNVRELDNAIQRALIL
QQGGLIQPQDFCLAVGAGSAPMPSLAPAPQESAPAEAAGGLGDDLRRREFQMIIDTLRAE
RGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAFLFAS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaggttttactggttgaagacgatcgcgccctgcgtgaagcactggctgac
acgctgctgttggcgggccatgactatcgggcggtcggttcggccgaggaagccttgcag
gccgtggagcaagagtccttcagcctggtggtcagcgacgtcaacatgcccggcatggac
ggccaccagttgctaggcctgctgcgcgcacgccagccgcaactgccggtgctgttgatg
accgcccacggcgcggtggagcgcgccgtcgatgccatgcgccagggcgcggcagactac
ctggtcaagcccttcgaacccaaggccctgattgagctggtggcgcgccatgcgcttggc
gtcgtgggtgttgcagacggcgagggcccgattgctgtcgagccggccagtgcgcaattg
ctggagctggcggccaaggtcgcccgcagtgattccacggtgctgatctccggcgagtcc
ggcaccggcaaggaggtgttggcgcgctacatccaccagcaatctcaccgcgccagccag
ccgtttatcgcgatcaactgcgcggcgatccccgacaacatgctcgaagccaccttgttc
ggccatgaaaagggctcgttcaccggcgccatcgccgcccaggccggcaagttcgagcag
gccgatggcggcaccatcctgctcgacgaaatctccgaaatgcccctgggcctgcaagcc
aagctgctgcgcgtgctgcaagagcgcgaagtggagcgggtgggcgcgcgcaagccgatc
cagctggatatccgcgtggtcgccaccaccaaccgcgaccttgctggcgaagtggcagca
gggcgcttccgcgaagatctgttctatcggctctcggtgttcccgttggcctggcgcccg
ttgcgtgaacgcccggccgatatcgtgccgctggccgagcgcctgttgagcaagcacgtc
aataaaatgaagcacgctcaggcgcgcctgtcggccgaagcccaggcttgcctgatcagt
tacccatggcccggcaacgtgcgcgagctggacaacgcgatccagcgcgcgctgattttg
cagcagggcggcctgatccagccccaggacttctgcctggccgtcggcgccggtagcgcg
ccaatgccgagcctggccccggccccacaggaaagcgccccggccgaggccgctggcggt
cttggtgacgacctgcgtcgccgtgaattccagatgatcatcgacaccctgcgcgccgag
cgtggccgccgcaaagaagcggccgagcgcctgggcatcagcccgcgcaccctgcgctac
aagctggcgcaaatgcgcgatgccgggatggatgtggaagcattccttttcgcgagctga
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