Pseudomonas shahriarae: HU773_008480
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Entry
HU773_008480 CDS
T07642
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02020
Two-component system
pshh02025
Biofilm formation - Pseudomonas aeruginosa
pshh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU773_008480
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_008480
09142 Cell motility
02040 Flagellar assembly
HU773_008480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pshh03021
]
HU773_008480
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pshh02035
]
HU773_008480
Transcription machinery [BR:
pshh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU773_008480
Bacterial motility proteins [BR:
pshh02035
]
Flagellar system
Flagellar assembly proteins
Stator
HU773_008480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QXH90894
LinkDB
All DBs
Position
1889092..1889832
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYNLYKKSARDSQGELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRSIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAHQEPSRDLEDE
RFQGALAEAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacagccagcggctacaacctttacaaaaagtcggcgcgtgacagccagggcgaattg
atcgagcgctatgcgcccctggtcaagcgcattgcctaccacctgctggcacgcctgccc
gccagtgtccaggtcgaagacctgatccaggcgggcatgatcggcctgctcgaagtgtcg
accaagtacgacgcgagcaagggtgcgagtttcgagacgtatgcgggtatccgtatccgt
ggcgcgatgctcgatgaggtgcgtaaaggtgattgggcgccgcgttcggtccaccgcaat
acccggatggtgagtgacgcaattcgctcaattgaagcaaaaaccggtcgcgacgctaaa
gatcacgaagttgcggccgaactccaattgagtctcgacgattactacgggattttgaac
gataccttgggcagccgcctgttcagtttcgacgacctgctacaggacggcgaacatgaa
gggctgcatgaggatggcgcgagtgctcaccaggagccttcacgcgacctggaagatgaa
cgcttccagggcgccctggcagaggcgattgccaatctgccggaacgtgagcggctggtg
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgggtcagccagcttcatagccaatgcgcggcccgcttgcgggggcgtttg
ggagagtggcgagcgcgctga
DBGET
integrated database retrieval system
