Pseudomonas shahriarae: HU773_009880
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Entry
HU773_009880 CDS
T07642
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshh03032
]
HU773_009880 (gyrA)
03400 DNA repair and recombination proteins [BR:
pshh03400
]
HU773_009880 (gyrA)
Enzymes [BR:
pshh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HU773_009880 (gyrA)
DNA replication proteins [BR:
pshh03032
]
Prokaryotic type
DNA Topoisomerases
HU773_009880 (gyrA)
DNA repair and recombination proteins [BR:
pshh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU773_009880 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QXH91157
LinkDB
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Position
2162996..2165650
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AA seq
884 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA
VVAMVERAGADSCRPETLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDTDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAIGEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEFDGEVIAAGDDSVDEPTLDAAADEEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaattgtcgggcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgtacggatggcccagccattctccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtggacggcgacaacgccgcagccatg
cgatacaccgaagtacgcatgaccaagctggcgcacgagctgctggccgacctgcataaa
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgttggtcaacggctccagcggtatcgccgtgggcatggccacc
aacatcccgccacacaacctcggtgaagtcatcgacggttgcctggcgcttatcgacaac
cctgagctgaccgtcgatgagctgatgcagtacatccccggcccggacttcccgaccgcc
gcaatcatcaacggtcgcgccggcatcatcgaagcctatcgtaccggtcgtggccgcatc
tatatgcgcgcccgttcgatgatcgaagacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgagctgccttaccagttgaacaaggcgcgtctgatcgagaagatcgccgag
ctggttaaagagaagaaactcgaaggcatcactgaactgcgcgacgagtctgacaaagac
ggtatgcgcgtggtgatcgagctgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaaagcgtgtttggtatcaacgtcgtggccctgatcgac
ggtcgcccgcgcatcctgaacctcaaggatctgctggaagccttcgtccgtcaccgtcgc
gaagtggttactcgccgtaccgtgttcgaactgcgcaaggcccgtgaacgtgggcacatc
ctggaaggccaggcggttgcactgtcgaacatcgacccggtcatcgccctgatcaaggct
tcgccgacgccgtcggaagccaaggaagcactgatcaagatgccatgggaatccagcgcg
gtagtagcgatggttgaacgtgccggtgccgattcgtgccgtccggagaccctggacccg
caatacggcctgcgcgatggcaagtacttcctgtcgccggaacaggcccaggctatcctg
gaactgcgcctgcaccgcctgaccggcctcgagcacgaaaagctgctggccgagtaccag
gaaatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgacgtgcgccgcact
gaaatccttgatgcgcgcctcgacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggtggctacgccaagacccagccgttggctgcataccaggcc
cagcgtcgtggtggtaaaggcaagtcggcgacgggcgtcaaggatgaggactacatcgct
cacctgctggtagccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacctacgagatcccggaagcgtcccgcgccgcccgtggtcgtccgctg
gtcaacctgttgccgctggacactgatgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcacttcatcttcatggccaccgccaagggcactgtgaagaagaccccg
ctggaatccttcagccgccagcgcagcgtgggcctgatcgccttggagctggacgaaggc
gacgtactgatttccgcagccattaccgatggcgagcgtgaagtcatgctgttctccgac
ggcggcaaggtgacacgcttcaaggaatccgacgtgcgtgccatgggccgtaccgctcgt
ggtgtgcgcggcatgcgtctgccggaagggcagaagctgatttccatgctgatcccggaa
gaaggcagccagatcctcaccgcttcggcccgtggttatggcaagcgtaccgccatcggc
gagttccccgagtacaagcgtggcggccagggtgttatcgccatggtcagcaacgatcgc
aacggccgcctggtcggcgcggtccaggtgctcgatggcgaggaaatcatgctgatttcc
gaccagggcaccctggtacgtacccgtgttgatgaagtgtcgagcctgggccgtaacacc
cagggcgtgaccttgatcaagctggccagcgacgagaccctggtgggtctggagcgtgtc
caggagccatcggaagtcgaaggcgaggagctggaaggcgaggaattcgatggcgaggtg
atcgcagccggcgatgacagcgtcgacgagccaaccctcgatgctgccgcagacgaagaa
gaaccgcaggaataa
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