Pseudomonas shahriarae: HU773_011650
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Entry
HU773_011650 CDS
T07642
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshh01002
]
HU773_011650
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshh01011
]
HU773_011650
Peptidases and inhibitors [BR:
pshh01002
]
Cysteine peptidases
Family C82
HU773_011650
Peptidoglycan biosynthesis and degradation proteins [BR:
pshh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HU773_011650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QXH91490
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Position
2614430..2615995
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AA seq
521 aa
AA seq
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MFKKHACYLSLCLLVAPLVAMADELPVEPPNPVQLALGQLSSVCPDLATQLDTPAELRLQ
AFYQQQGNAALWSVDDRRTALQGQLLLLADDGLDPAHYRLPDVATTSNVLCTDFATSQHY
LQALHDLHYGRLQQAHYEPLWHSQPPTEDPAVAVLALANAGLADMPAAFDQARPAADLYR
SLRAAYATQRLQPLPQWGVIADGPLLRPGGEDPRVPALARRLVSGGQLASVPKGNQYGNE
LVAAVKRFQASHSLQADGVIGPGTVAELNVSPAVRREQLRVNLERFRWLAQDLEPDGILV
NVAAAQLSVYQGGVPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPPTIMREDKLPA
IRLNPEYLRQQNLKVLDSEGRALSPEQVDWSHPGNILLRQDAGPRNPLGKIVMRFPNPFS
VYLHDTPSQPLFSKGPRAFSSGCVRVEQPMLLRDLLVNPAEKARTEELLATGLTHEFRLA
TPVPVLLGYWTVQVDSQGALLYAPDIYGRDGVLLKALGAVL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaaacacgcatgttacttgagcctttgcttgctcgtagcaccattggtcgcc
atggccgatgaactgccagtcgagccgccaaacccagtacagctggcacttgggcagttg
tcgagtgtttgccccgatttggcgacccaactggatacaccggccgagctgcggctgcag
gctttttaccagcaacaaggcaatgctgccctgtggtcggtggacgatcgccgaacggcc
ctgcagggccagttgctgttgctggccgacgacggcctcgatccggcgcactaccggctg
cccgacgtggcaaccaccagcaatgtgctgtgtaccgacttcgcaaccagccagcactac
ctgcaggccctgcatgacttgcactatggccgtttgcagcaggcccattacgagccgctg
tggcattcccagccgccaactgaggatccggccgttgcggtgctggccctggccaacgcg
gggcttgcggatatgccggcggcgttcgaccaggcccggcccgcagccgatctgtatcgt
agcctgcgcgcggcctatgccacccaacgcctgcaacccttgccgcagtggggtgtgatt
gccgacggcccattgctgcgtcccggcggcgaagacccacgggtaccggccctggcccga
cgcctggtcagtggcggccagttggcgagcgtgcccaagggcaatcaatacggcaatgag
ctggtggcggcggtgaagcgcttccaggccagccattcgctgcaagccgacggggtgatc
ggcccgggcacggtggccgagcttaacgtcagcccggcggtgcgccgcgagcaactgcgg
gtcaacctcgaacgttttcgctggctggcccaggacctggagccggatggcattctggtc
aacgtcgcggcggcccagttgagtgtctaccagggtggtgtgcccgtgtggcagacccgc
ctgcaggtgggccgcgccgaacggcagacgccgctgctcaagtcgcgcatcacacgcctg
accctcaaccccacctggaccatcccgccgaccatcatgcgcgaggacaaactgccggcc
atccgcctgaacccggagtacctgcgccaacagaacctcaaagtgctcgacagtgaaggc
cgcgccctgtcgcccgagcaggtggactggtcgcaccccggcaacatcctcctgcgccag
gacgccggcccgcgcaacccgctgggcaagatcgtcatgcgcttccccaatccattctcc
gtgtacctgcacgatacgcccagccaaccgttgttcagcaaggggccacgggcgttcagc
tcggggtgtgtgcgggtggagcagccgatgctgctgcgcgatctgctggtgaacccggca
gaaaaagcgcggaccgaggaattgctggcgaccgggctgacccatgagttccgcctggct
acgccggtcccggtgttgctggggtactggacggtgcaggtggatagccagggggcgttg
ctgtacgcgccggatatctatggccgcgatggcgtgctgttgaaggctctgggcgcggtc
ctgtag
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