Pseudomonas shahriarae: HU773_012795
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Entry
HU773_012795 CDS
T07642
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshh03032
]
HU773_012795
03400 DNA repair and recombination proteins [BR:
pshh03400
]
HU773_012795
Enzymes [BR:
pshh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU773_012795
DNA replication proteins [BR:
pshh03032
]
Prokaryotic type
DNA Topoisomerases
HU773_012795
DNA repair and recombination proteins [BR:
pshh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU773_012795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
QXH91696
LinkDB
All DBs
Position
complement(2872190..2873227)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDSTVPADLPRDLHYVDDSQPGLSRRKLRGKFQYFDSHGQRLTDADEIQRINALAIPPA
YTDVWICADPKGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQQFGNALPKLRKQLQ
AQVDAPGFNREKVLATVVLLLDATLIRVGNSQYARDNRSYGLTTLRTRHVDIKGSEIQFQ
FRGKSGVEHQVSIKDRRLATVLKRCLELPGQNLFQYLDENGERRTVSSTDVNAYLHSLTG
ADFTAKDYRTWAGSALALAVLRELAWQPESDAKRHVVEMVKNVARQLGNTPAVCRKCYIH
PAVLEHFSQGGLAKLPRPRVRKGLKAEEVGLAMFLEQLQTAASPM
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactccaccgtgcctgccgacctgccccgtgacctgcactacgttgatgacagc
caaccgggcctgagccgccgtaaactgcggggcaagttccagtatttcgacagccatggc
caacgcctgaccgacgccgacgaaatccagcggatcaacgccctcgccatcccgccggcc
tataccgacgtgtggatctgcgccgaccccaagggccatctgcaggctaccgggcgcgat
gcgcgcggccgcaagcaataccgttatcacccacgctggcgcgaggtgcgcgacagtgac
aagtattcgcgcctgcagcagttcggcaatgcgctgcccaaattgcgcaagcaactgcaa
gcgcaggtcgacgcaccgggcttcaatcgggagaaagtcctggccaccgtggtgttgttg
ctcgatgccacgctgatccgcgtcggcaacagccaatacgcccgcgataaccgctcctat
ggcctgaccaccctgcgcacccgtcacgtggatatcaagggcagcgaaatccagttccag
ttccgtggcaagagcggtgtcgagcatcaggtcagcatcaaggaccggcgcctggccacc
gtgctcaagcgctgcctggagttgccggggcagaacctgttccagtacctggacgaaaac
ggcgagcggcgtaccgtcagctccaccgacgtcaacgcctacctgcacagcctcaccggc
gccgactttaccgccaaggactatcgcacctgggccggcagcgccctggccctggcggtg
ttgcgggagctggcgtggcaaccggagtcggatgccaaaaggcacgtggtggagatggtc
aagaacgtcgcccggcaactgggcaacaccccggcggtgtgccgcaagtgctacatccac
ccggcggtgctggagcacttcagccagggcgggctggcgaaactgcccaggcccagggtg
cgcaagggcttgaaagccgaagaggtggggctggcgatgtttcttgagcaactgcagacg
gcggcatcaccgatgtag
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