Pseudomonas shahriarae: HU773_014045
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Entry
HU773_014045 CDS
T07642
Name
(GenBank) hypothetical protein
Organism
pshh
Pseudomonas shahriarae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_13
Big_6
Cadherin_4
Big_3_5
Cadherin_5
Big_9
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
QXH86830
LinkDB
All DBs
Position
complement(3144084..3151361)
Genome browser
AA seq
2425 aa
AA seq
DB search
MNKNAVNVAVVDGKTITESVELRTTKQGDPVRIKAVKDGKYIIAEAGEKTVAPENLTIKR
VGNDLHVATEGTDPDQPQLIIEGFYEHPGQLVGVAEDGAYYEYISSDAEDDHAAAFLADG
VSSPQVLGSEELVGFGEGLVAGNGIGWFWPALLGLGALGLLGAAYKLTRDDDNNDNKDGG
SAIAPSAPTLSDVTDDVGDVQGPINKGDSTDDRTPTFSGEGTPGNTIIIEDNGKPIGEVV
VGDDGKWEFTPTTPLPEGEHSIIVVEKDKDGNTSGPSDEFDFIIDITAPGKSIIDAISDD
EGDQQGVIAPNGLTDDKTPTLTGTAEPGATLEIYANDEKIGETTVEADGSWTFTPSPALE
DGEYSFTTIAIDAAGNAGLPSDPYIVTIDTTAPVKPGIGTGGIEEAIDNVGPIIGDIGNG
GVTDDGTPTFGGGGLQPGDKVTIIDDGVEIGEVIVGEDGRWEFTPDPELIEGPHPITVIV
TDPAGNKSEPSDPYIVIVDTTAPVKPGIGTGGIEEAIDNVGPIIGDIGNGGVTDDGTPTF
GGGGLQPGDKVTIIDDGVEIGEVIVDEDGRWEFTPDPELIEGPHPITVIVTDPAGNASEP
SDPYIVIVDTTAPVKPGIGTGGIEEAIDNVGPIIGDIGNGGVTDDGTPTFGGGGLQPGDK
VTIIDDGVEIGEVIVDEDGRWEFTPDPELIEGPHPITVIVTDPAGNASEPSDPYIVIVDT
TAPVKPGIGTGGIEEAIDNVGPIIGDIGNGGVTDDGTPTFGGGGLQPGDKVTIIDGSVEI
GEVIVGEDGRWEFTPDPELIEGPHPITVIVTDPAGNASEPSDPYIVIVDTTAPVAPTIDS
VFDDQGTSTGNIMPGDITDDSQPEIRGQAEPGTTVIIYDNGREIGRVPVAADGSWTHTPV
PPLLNGPHDLTAEAVDADGNTSAPSNSVDFELVAGGLPPAPSITGVFDDIADNVGNIMPG
ESTNDTEPQVSGTAEAFSTVTLFANGVPVGSVVADALGNWTITPSPALAPGLNNLTATAT
NSAGNVSPATGDYPITVDITPPAAADASQLEDNVGAITGPINSGDITDDNTPTFSGTAEP
NTTLIIYDGGVEIDRVPVDGAGNWSYTPARPLADGPHSFSTEVVDAAGNRSPESTPIDFT
VDTSAVAISIEQALDNVGPNQDPLASGSVTDDATPTLRGQATPGSTVNIYLDGVLLQEGV
AVNNAGRWEYEVNPPLPEGSYAFTATVVTAAGGESAPTAEFNLEIDLTPPAAPTIDEIRD
DVGDIQDPLVDGSTTDDTTPTLVGSGVAGDTIIIRNNGNELDRVTVQPDGSWTYTPNPPL
NNGSTNQFDVIAEDPAGNQSAPSDPWTIIIDTAAPVAPTIDSVFDDQGTSTGNIMPGDIT
DDSQPEIRGQAEPGTTVIIYDNGREIGRVPVGADGSWTHTPVPPLLNGPHDLTAEAVDAA
GNTSAPSNSVDFELIAGGLPPAPSITGVFDDIADNVGNIMPGESTNDTEPQVSGTAEAFS
TVTLFANGVPVGSVVADALGNWTITPSPALTPGLNNLTATATNSAGNVSPATGDYPITVD
ITPPAAADASQLEDNVGAITGPINSGDITDDNTPTFSGTAEPNTTLIIYDGGVEIDRVPV
DGAGNWSYTPARPLADGSHSFSTEVVDAAGNRSPESTPIDFTVDTSAVAISIEQALDNVG
PNQDPLASGSVTDDATPTLRGQATPGSTVNIYLDGVLLQEGVAVNNAGRWEYEVNPPLPE
GSYAFTATVVTAAGGESAPTADFNLEIDLTPPAAPTIDEIRDDVGDIQDPLVDGSTTDDT
TPTLVGSGVAGDTIIIRNNGNELDRVTVQPDGSWTYTPNPALNNGSTNVFDVIAQDPAGN
QSAPSAPWTVIIDTTAPITQITSVINDDGTPTPINPGDETTDRTPLISGTSEPGSTVTIF
DSGVPIDTVQVDEFGNWSYSVVTPLSSGSHGLTASSVDLAGNQGPVSDQFDLRITSVFGT
YSNIESFDGAPLGGIAVGSVLDLKAMAITNISGSSDVVPVNPNTISDPMLRIYGKLDFDL
KGDSSSVLVMEASGLGAQHINEIRFYDANGVLIHTDTVSKEPGSQQFIMPGGMEFSRFEI
ETDVNAGSGLFVDNLILANGPIKTEGFEGLPLNHKFDLGVPFELDLFTLTRIENNVPRGA
GVGLINQGHAAGQQLAILGAKVEFDLKGETASTLNFKLTLQAGRVLDTIITFYNADGELI
HTEIMLGGSDGLRHISMPDGLEFSSFVIDNPDSRHLYINEISFADLALPNLPLADESNTT
SDHVIYVTEGDEAALVAEGSDAIDTLVLTGANQLLDLSALGNQVSSIEVIDLTGTGDNTL
NLSLSDVLSQGGDSLFTADDTTQMMIKGNAGDVVNLDDLLADGTDPGDWAGQGQVIVEGV
TYNVFQHSSLDAQLLVQDGVTTNLV
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaaacgcagtgaacgtcgccgtagtggacggcaaaacgattaccgaatcggtg
gagcttcgcaccaccaaacaaggcgatccggtccgaatcaaagcggtcaaggacggtaaa
tacattatcgcggaggccggtgaaaaaaccgttgcccccgagaacctgaccatcaagcgc
gtcggcaacgacctgcatgtggccaccgaaggtaccgaccctgatcagccacaactgatt
atcgaaggtttttacgagcaccccggccagttggtcggtgtagccgaagacggtgcctac
tacgagtacatctcttccgacgccgaagacgatcacgcagcggcatttctggccgatggc
gtgtcgtcgccacaagtactgggttccgaggaactggtaggtttcggtgaaggcctggtt
gccggtaatggcatcggctggttctggccagctctgctcggtctgggcgcgctcggtttg
ctgggcgccgcttacaagctgacccgcgacgatgacaataacgataacaaggatggcggt
tcggctatcgctccgagcgccccaaccttgtctgacgtcaccgacgatgtcggcgatgtg
caaggcccaatcaacaagggcgactctactgacgaccgtaccccgaccttcagcggcgaa
ggcacccccggcaacaccatcatcatcgaagacaacggcaagccgatcggcgaagtggtg
gtgggtgatgacggcaagtgggagttcacgcctaccacgccgctgccggaaggcgagcac
tcgatcatcgttgtcgagaaggacaaagacggcaataccagcgggccttcggacgaattc
gatttcatcatcgacatcaccgcgccaggcaaatcgatcatcgacgccatcagtgatgac
gagggtgatcagcaaggtgtgatcgcaccaaatggcctcaccgacgacaaaaccccgacg
ctgacaggtaccgccgagccaggtgccaccctggaaatttacgccaacgacgaaaaaatc
ggcgagaccaccgtcgaagccgacggcagctggacgttcaccccatcgccagccctggag
gatggtgaatacagctttaccaccatcgccattgacgcggcgggcaatgccggcctgccg
tcagacccttacattgtcaccattgacaccactgccccggtcaagccaggcattggaacc
ggtggcatcgaagaagccatcgacaacgttggcccgatcatcggcgatatcggtaatggc
ggcgtcaccgacgacggcaccccgacctttggcggtggcggcctgcaacctggcgacaaa
gtcaccatcattgatgacggcgtggaaatcggcgaagtcattgttggcgaagacggtcgt
tgggagttcactccggaccctgagctgattgaaggcccgcacccgatcaccgtgattgtc
acggatcctgcaggcaacaaaagcgaaccgtccgatccgtacatcgtgattgtcgacact
accgcgccagtcaaaccaggcatcggtaccggtggtatcgaagaagccatcgacaacgtt
ggcccgatcatcggcgatatcggtaatggcggcgtcaccgacgacggcaccccgaccttt
ggcggtggcggcctgcaacctggcgacaaagtcaccattattgatgacggcgtggaaatc
ggcgaagtcattgttgacgaagacggtcgttgggagttcactccggaccctgagctgatt
gaaggcccgcacccgatcaccgtgatcgtgaccgacccggcgggcaacgccagcgagccg
tccgatccgtacatcgtgattgttgacaccactgcaccggtcaaaccaggcatcggcacc
ggtggcatcgaagaagccatcgacaacgttggcccgatcatcggcgatatcggtaatggc
ggcgtcaccgacgacggcaccccgacctttggcggtggcggcctgcaacctggcgacaaa
gtcaccattattgatgacggcgtggaaatcggcgaagtcattgttgacgaagacggtcgt
tgggagttcactccggaccctgagctgattgaaggcccgcacccgatcaccgtgatcgtg
accgacccggcgggcaacgccagcgagccgtccgatccgtacatcgtgattgttgacacc
actgcaccggtcaaaccaggcatcggcaccggtggcatcgaagaagccatcgacaacgtt
ggcccgatcatcggcgatatcggtaatggcggcgtcaccgacgacggcaccccgaccttt
ggcggtggcggcctgcaacctggcgacaaagtcaccattattgatggcagcgtggaaatc
ggcgaagtcattgttggcgaagacggtcgttgggagttcactccggaccccgagctgatt
gaaggcccgcacccgatcaccgtgatcgtgactgacccggcgggcaacgccagcgagccg
tccgatccgtacatcgtgatcgttgacaccaccgcccctgtggccccgaccatcgacagc
gtattcgatgaccagggcacctcgaccggcaatatcatgccgggcgacatcaccgacgat
tcccagccggaaatccgtggtcaggccgagcctggcacgacggtgatcatttatgacaat
ggccgggaaatcggccgcgtacccgtcgctgccgatggcagttggacccacaccccggtg
ccgccactgctcaatggcccgcatgacctgacggcagaggctgtcgatgctgatggtaac
accagcgcgccgtccaacagcgtcgacttcgagctggttgccggtggcctgccgccagcg
ccaagcatcaccggtgtgttcgacgatatcgccgataacgtcggcaacatcatgccaggc
gaaagcaccaacgataccgagccacaagtgagtggtaccgctgaggccttctccaccgtc
actctgttcgccaacggtgtccccgtcggtagcgtagtggcagacgcactcggcaactgg
actatcaccccaagcccggccttggcgccaggtctgaacaacctgactgcaaccgcgacc
aactcggccggcaatgtcagcccggcgactggcgattatccgatcaccgtggatatcact
ccaccggcggcggcagatgccagtcagcttgaagacaacgtgggtgcgattaccggtccg
atcaacagcggcgatatcactgacgacaataccccgacgttcagcggtactgccgagccc
aacaccaccttgatcatctatgacggtggcgtcgagattgatcgtgtaccggtggatggc
gctggtaactggagctacaccccggcacgaccgctggccgatggcccgcatagcttcagc
accgaagtcgtggacgcagccggtaaccgtagccctgaaagcacgccgatcgacttcacc
gtcgataccagtgccgttgccatcagcatcgaacaggcgctggataacgtgggcccgaac
caggatcctctggccagcggcagcgtgaccgacgacgccacaccgaccctgcgtggtcag
gcaacaccgggatcgaccgtcaatatctacctcgatggcgtgctgttgcaggagggtgta
gcggtcaacaatgccggtcgttgggagtacgaagttaacccgccgctgcccgaaggtagc
tatgcgttcaccgcaacagtggtcaccgccgcaggtggtgaaagcgcaccgacggctgaa
ttcaaccttgaaatcgacctgacgcccccggcggccccgaccattgatgaaatccgcgat
gacgtgggcgatatccaagacccgctggtggatggttcgaccaccgacgacaccacaccg
accctggtgggcagtggcgtagccggcgacacgatcattatccgcaacaacggtaatgaa
ctggaccgcgtcaccgtgcagccggatggtagctggacctacacgccaaacccgccgctg
aacaatggttcgaccaatcagtttgacgtaatcgccgaggatccggccggcaaccaaagc
gcgccgtccgatccatggaccatcatcatcgacaccgcagcccctgtggccccgaccatc
gacagcgtgttcgatgaccagggcacctcgaccggcaatatcatgccgggcgacatcacc
gacgattcccagccggaaatccgtggtcaggccgagcctggcacgacggtgatcatctat
gacaatggccgggaaatcggccgcgtacccgtcggtgccgatggcagttggacccacacc
ccggtaccgccactgctcaatggcccgcatgacctgacggcagaggctgtcgatgctgct
ggtaacaccagcgcgccgtccaacagcgtcgacttcgagctgattgccggtggcctgccg
ccagcgccaagcatcaccggtgtgttcgacgatatcgccgataacgtcggcaacatcatg
ccaggcgaaagcaccaacgataccgagccacaagtgagtggtaccgctgaggccttctcc
accgtcactctgttcgccaacggtgtccccgtcggtagcgtagtggcagacgcactcggc
aactggactatcaccccaagcccggccttgacgccaggtctgaacaacctgactgcaacc
gcgaccaactcggccggcaatgtcagcccggcgactggcgattatccgatcaccgtggat
atcactccaccggcggcggcagatgccagtcagcttgaagacaacgtgggtgcgattacc
ggtccgatcaacagcggcgatatcactgacgacaataccccgacgttcagcggtactgcc
gagcccaacaccaccttgatcatctatgacggtggcgtcgagattgatcgcgtaccggtg
gatggcgctggtaactggagctacaccccggcacgaccgctggccgatggctcgcatagc
ttcagcactgaagtcgtggacgcagccggtaaccgtagccctgaaagcacgccgatcgac
ttcaccgtcgataccagtgccgttgccatcagcatcgaacaggcgctggataacgtgggc
ccgaaccaggatcctctggccagtggcagcgtgaccgacgacgccacaccgaccctgcgt
ggtcaggcaacaccgggatcgaccgtcaatatctacctcgatggcgtgctgttgcaggag
ggtgtagcggtcaacaatgccggtcgttgggagtacgaagttaacccgccgctgcccgaa
ggtagctatgcgttcaccgcaacagtggtcaccgccgcaggtggtgaaagcgcaccgacg
gctgatttcaaccttgaaatcgacctgacgcccccggcggccccgaccattgatgaaatc
cgcgatgacgtgggcgatatccaggacccgctggtggatggttcgaccaccgacgacacc
acaccgaccctggtgggtagtggcgtagccggcgacacgatcattatccgcaacaacggt
aatgaactggaccgcgtcaccgtgcagccggacggtagctggacctacacgccaaacccg
gcgctgaacaatggctcgaccaacgtgttcgacgtgattgcccaggatccggccggtaac
cagagtgcaccgtctgctccatggacagtgatcattgacaccacggcgccgatcacgcag
atcacgtctgtgatcaatgacgacggcaccccgacccctatcaatccgggcgacgagacg
acggaccgtaccccactgatcagtggtaccagcgagcctggcagtaccgtgaccatcttc
gacagtggcgtgccaatcgacacggtacaggttgatgagttcggtaattggagttactcg
gttgttacaccgctgagttcaggttctcatggtctgacggcttcgtcggtcgacctagcc
ggtaatcaagggccggtcagtgatcaatttgatcttcgtattacgtcggtttttggcacc
tatagcaacatcgagagttttgatggtgcgccactcggcggtattgcagtgggaagtgtt
cttgatcttaaggcgatggcgatcacgaacataagcggctcgagcgatgtggtgcctgtt
aaccctaacactatcagcgacccaatgttgcggatctacggtaaacttgattttgatttg
aagggggattcttcaagtgtacttgttatggaagcgtccggtcttggtgcacagcatatt
aacgaaattcgattttatgacgcgaatggcgtgctgattcatacggataccgtttctaaa
gagccaggctcgcagcagtttataatgcctggaggcatggagtttagccgatttgagatt
gagactgacgttaatgcagggagtggcctgttcgtagacaatctcatcttggcaaatggc
ccgatcaagaccgaaggttttgaggggctgccgctgaatcataaatttgatttgggtgtt
ccgtttgagctcgatttgtttacgctcacaaggatagaaaataatgttccgaggggggct
ggtgttggccttattaaccaggggcatgctgctgggcagcaactggcgatccttggggcc
aaggttgagttcgacctgaaaggcgaaacggcaagtacactcaattttaaattaacgctt
caagccggtcgtgtgttggataccattattactttttacaatgcggacggggagctgatt
catactgagattatgctgggggggtcagatggactgcggcatatctcgatgcctgacggt
ttggagttttctagctttgtaatagacaatcctgactcaagacatttatatattaacgag
atatctttcgcagacttagcccttcctaacttgccgttggcggacgagtcaaatacaact
tctgaccatgtcatctatgtcaccgagggtgacgaagcggcactggtagccgaaggcagc
gatgccatcgatacgctggtgttgacgggcgccaaccagctcctggacctgtcggccctg
ggcaaccaggtctcgtccattgaggtcatcgatctcacgggcactggtgacaacacgctg
aacctgtcgctgtccgatgtgctgtcgcaagggggggacagcctgttcaccgcggatgac
accacgcagatgatgatcaaaggcaacgctggcgacgtcgtcaacctcgacgacctgctg
gccgacggcaccgacccgggtgattgggcaggtcagggtcaggtgatcgtggaaggggtg
acgtacaacgtgttccaacactccagcctcgatgctcaattgctggttcaggacggggta
accaccaacctggtgtaa
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integrated database retrieval system
