Pseudomonas shahriarae: HU773_015220
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Entry
HU773_015220 CDS
T07642
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02025
Biofilm formation - Pseudomonas aeruginosa
pshh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU773_015220 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_015220 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshh02044
]
HU773_015220 (tssH)
Secretion system [BR:
pshh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU773_015220 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
AAA_22
Clp_N
ClpB_D2-small
NACHT
TniB
AAA_7
NBD_SMAX1
nSTAND3
AAA_24
ATPase_2
AAA_25
AAA_29
Sigma54_activat
AAA_18
TsaE
RsgA_GTPase
nSTAND6
Hpr_kinase_C
ECR1_N
Motif
Other DBs
NCBI-ProteinID:
QXH91947
LinkDB
All DBs
Position
complement(3437887..3440460)
Genome browser
AA seq
857 aa
AA seq
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MMNVDLQQLIRVLTTHTRRDLERAAERCVTRGGTQVLVEDMLLALLEHPQGLLVRALQDA
GVEQGELQATLQPRVGQGTSRNPVFAPLLVQWLQQALVVAQLELAQSQVGDAALILALLR
NPQSHAGSRYQVLLARLDAQRLLEFALSAEIEGSRGTAGANNESLLQRFTHDLTQQALEG
RVDPVLCRDAEIRQLTDILARRRKNNPIIVGEAGVGKTALVEGLARQIACGQVPPVLKDT
RLLVLDMGLLQAGASIKGEFERRLKGVIDEVNASPVPVILFIDEAHTLIGAGSAPGSGDA
ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVHVQEPSVDDAVTILRGLTA
VYEASHGVYVRDDAVVAAAQLSARYLAGRQLPDKAVDLLDTACARVRISLVTAPPALQAV
AAQLAESTGQHQALCRDRDAGLPIDPGALQVLAARLQTIGCEHEHLKQCWTRQREMAEAI
LALRIQVSQARQSGQAIEVLEQQLCEAHGSLLAEQSHQRLVSFEVCPRLVAEVVSAWTGI
PLSQVACEHSTQVRDFATDLRARILGQAHAVQALDRSMRAVAAGLNRPDAPVGVFLLVGP
SGVGKTETALALAELLYGGERFLTTINMSEYQEPHSLSRLIGAPPGYVGYGEGGVLTEAV
RQKPYSVLLLDEVEKAHSGVMNLFYQVFDKGRANDGEGREIDFRNTLILMTSNLGSECTI
DLCRATPHPTPQALQEALAPLLKQHFKPALLARMRVVPYYPINGAVLRELVESKLQRLAQ
RLLQRQLAFSYCPRLVDYLAERCTHTDSGARYVDQWIDANLLPLVVDRLLEAMARDEHLQ
RAHGTLDGDGHVICEFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgtggacttgcaacaactgattcgcgtgttgacgacacacactcgccgagac
ctggagcgtgccgccgaacgctgtgtgacccggggcgggacgcaagtcctggtggaggac
atgttgctggcgctactggagcacccgcaaggattgctggtgcgcgcgctgcaagatgcc
ggtgtcgaacagggcgagttgcaagccaccctgcagcccagggtgggccagggcacttca
cgcaatccggtgtttgcgccgttgctggtgcaatggttgcagcaagcgctggtggttgcc
caactggaattggcgcaatcccaggtcggtgacgcagccttgatcctcgccttgctgcgt
aacccacagtctcacgcaggcagtcgttatcaggtgctgctggcgcgcctcgatgcgcag
cgcctgcttgaattcgccctgagcgccgagattgagggttcccgtgggacagccggcgcc
aacaatgagtcgttgttgcagcgcttcacccatgatctgactcagcaagccttagagggg
cgggttgacccggtattgtgccgcgacgcagaaatccgccaactgaccgatatcctggcg
cgtcggcgcaagaacaatccgatcattgtcggtgaggccggtgtcggcaagactgcgctg
gtcgagggtctggcccggcagatcgcctgtgggcaagtgccgccagtgctcaaggatacg
cgcctgctggtcctcgacatggggctgctgcaggccggtgccagcatcaagggcgagttc
gagcggcggctcaagggcgttatcgacgaagtgaatgcctcaccggtgccggtgatcctg
tttattgacgaggcacacaccttgatcggtgccggcagcgcgcccggcagcggcgatgcg
gcgaacctgctcaagccggcgctggcccgtggcgagctgcgtaccatcgccgccaccacc
tggtcggagtacaagaaatacttcgaaaaggatccggcattggcccggcgctttcagccg
gtgcatgtccaggagcccagtgtcgatgacgcagtgaccatcctgcggggtctcactgcg
gtgtatgaagccagccatggcgtgtacgtgcgcgatgacgccgtggttgccgccgcgcag
ttgtctgcccgttacctggcggggcgacagttgcccgacaaggccgtggatctgctcgat
acggcctgcgcccgtgtgcgcatcagcctggtgacagccccgccggcgttgcaggccgtg
gcggcgcagctggctgaaagcaccggccagcaccaggcgctttgccgcgatagggacgct
gggttacctatagatccgggcgcgctgcaggttctggctgcacgcctgcaaaccatcggt
tgcgaacacgagcacctcaagcagtgctggacgcgccagcgcgagatggccgaagcgata
ctggccctgcgcatacaggtgagccaggctcgtcagtcggggcaggcaatcgaggtgctt
gagcagcaattgtgcgaggcccacggcagtctgctggccgagcaatctcaccagcgcctg
gtcagcttcgaagtgtgcccacggctggtggcggaagtagtcagcgcgtggacgggaatt
ccgctgagccaggtggcctgcgagcacagcacccaggtccgcgatttcgccaccgatctg
cgggcgcgcattcttggccaggcgcacgccgtacaggcgctggatcgctcgatgcgtgcg
gttgcggcaggcctgaaccgccccgatgcgcccgtgggcgtgtttctgctggtcggcccc
agtggcgtcggcaagacagaaacggcactggccctggccgagctgttgtatggcggtgag
cggttcctgaccactatcaacatgtccgagtaccaggagccacactcactgtcgcgcctg
ataggtgctccgcccgggtatgtcggctatggcgaaggtggcgtcctcaccgaggcggtc
aggcaaaagccctattcggtgctgctgctcgatgaagtcgagaaggcgcactccggtgtg
atgaacctgttctaccaggtcttcgacaaagggcgggccaatgacggtgagggacgtgag
atcgactttcgcaacaccctgatcctgatgacctccaaccttggcagcgaatgcaccatc
gacctgtgccgggccacaccgcatcccaccccacaagcgttgcaggaagcacttgcgccg
ctgctcaagcagcatttcaagccggcgctgctggcccgtatgcgcgtagtgccgtactac
ccgatcaacggagcggtgctgcgggaattggtagaaagcaaattacagcgcctggctcag
cgtttgttgcagcgccagttagcgttcagctattgcccgcggctggtcgattacctggca
gagcgctgtacccacaccgacagcggggcgcggtatgtcgatcaatggatcgacgccaat
ctattgcccctggttgtcgatcgcctgcttgaggcaatggccagggacgagcatctgcag
cgtgcccacgggacgctggatggcgacggtcacgtaatctgtgagtttgcgtga
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